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Hydrogen bonds are a common feature in protein folding and aggregation. Due to their chemical peculiarities in terms of strength and directionality, a particular attention must be paid to the definition of the hydrogen bond potential…

Biomolecules · Quantitative Biology 2012-08-13 Marta Enciso

We discuss a general class of boundary conditions for bosons living in an extra spatial dimension compactified on S^1/Z_2. Discontinuities for both fields and their first derivatives are allowed at the orbifold fixed points. We analyze…

High Energy Physics - Theory · Physics 2014-11-18 Carla Biggio , Ferruccio Feruglio

At the fundamental level, our understanding of water hydrogen-bond dynamics has been largely built on the detailed analysis of classical molecular simulations. The latter served to develop a plethora of hydrogen bond definitions based on…

Chemical Physics · Physics 2013-08-06 Diego Prada-Gracia , Francesco Rao

We present a method for establishing invariant manifolds for saddle--center fixed points. The method is based on cone conditions, suitably formulated to allow for application in computer assisted proofs, and does not require rigorous…

Dynamical Systems · Mathematics 2014-08-29 M. J. Capiński , A. Wasieczko

We consider a rigid body freely moving in a compressible inviscid fluid within a bounded domain $\Omega\subset\mathbb{R}^3$. The fluid is thereby governed by the non necessarily isentropic compressible Euler equations, while the rigid body…

Analysis of PDEs · Mathematics 2025-12-11 Frédéric Rousset , Pei Su

Biological adhesion is a critical mechanical function of complex organisms operating at multiple scales. At the cellular scale, cell-cell adhesion is remarkably tunable to enable both cohesion and malleability during development,…

Soft Condensed Matter · Physics 2022-03-07 Dimitri Kaurin , Pradeep K. Bal , Marino Arroyo

As a guide to constitutive specification, driving forces for dislocation velocity and nucleation rates are derived for a field theory of dislocation mechanics. A condition of closure for the theory in the form of a boundary condition for…

Materials Science · Physics 2016-08-31 Amit Acharya

We consider inhomogeneous non-oriented Bernoulli bond percolation on $\mathbb{Z}^d$, where each edge has a parameter depending on its direction. We prove that, under certain conditions, if the sum of the parameters is strictly greater than…

Probability · Mathematics 2025-01-03 Pablo A. Gomes , Alan Pereira , Remy Sanchis

We show that any two geometric triangulations of a closed hyperbolic, spherical or Euclidean manifold are related by a sequence of Pachner moves and barycentric subdivisions of bounded length. This bound is in terms of the dimension of the…

Geometric Topology · Mathematics 2021-02-08 Tejas Kalelkar , Advait Phanse

A topological argument is constructed and applied to explain subharmonic mode locking in a system of coupled oscillators with inertia. Via a series of transformations, the system is shown to be described by a classical XY model with…

Condensed Matter · Physics 2009-11-07 M. Y. Choi , D. J. Thouless

This paper provides a detailed study of $4$-dimensional Chern-Simons theory on $\mathbb{R}^2 \times \mathbb{C}P^1$ for an arbitrary meromorphic $1$-form $\omega$ on $\mathbb{C}P^1$. Using techniques from homotopy theory, the behaviour under…

High Energy Physics - Theory · Physics 2022-01-20 Marco Benini , Alexander Schenkel , Benoit Vicedo

We introduce a new technique for proving the classical Stable Manifold theorem for hyperbolic fixed points. This method is much more geometrical than the standard approaches which rely on abstract fixed point theorems. It is based on the…

Dynamical Systems · Mathematics 2007-05-23 Mark Holland , Stefano Luzzatto

We propose a first example of a simple classical field theory with nonholonomic constraints. Our model is a straightforward modification of a Cosserat rod. Based on a mechanical analogy, we argue that the constraint forces should be modeled…

Mathematical Physics · Physics 2007-05-23 Joris Vankerschaver

In this paper we extend to a generic class of piecewise smooth dynamical systems a fundamental tool for the analysis of convergence of smooth dynamical systems: contraction theory. We focus on switched systems satisfying Caratheodory…

Optimization and Control · Mathematics 2011-10-06 Mario di Bernardo , Davide Liuzza , Giovanni Russo

The physical nature and the correct definition of hydrogen bond (H-bond) are considered.\,\,The influence of H-bonds on the thermodynamic, kinetic, and spectroscopic properties of water is analyzed.\,\,The conventional model of H-bonds as…

Chemical Physics · Physics 2015-09-02 I. V. Zhyganiuk , M. P. Malomuzh

Compaction bands play a key role in the deformation processes of porous rocks and explain different aspects of physical processes in geological formations. The state-of-the-art description of the localized strains that lead to compaction…

Geophysics · Physics 2022-02-09 Roberto J. Cier , Nicolas A. Labanda , Victor M. Calo

We present the theory of time-dependent point transformations to find independent dynamical normal modes for 2D systems subjected to time-dependent control in the limit of small oscillations. The condition that determines if the independent…

Quantum Physics · Physics 2017-05-22 I. Lizuain , M. Palmero , J. G. Muga

We present a topological proof of the existence of invariant manifolds for maps with normally hyperbolic-like properties. The proof is conducted in the phase space of the system. In our approach we do not require that the map is a…

Dynamical Systems · Mathematics 2011-03-11 Maciej J Capinski , Piotr Zgliczynski

Necessary conditions for asymptotic stability and stabilizability of subsets for dynamical and control systems are obtained. The main necessary condition is homotopical and is in turn used to obtain a homological one. A certain extension is…

Dynamical Systems · Mathematics 2022-11-15 Matthew D. Kvalheim

We prove the existence of at least $cl(M)$ periodic orbits for certain time dependant Hamiltonian systems on the cotangent bundle of an arbitrary compact manifold $M$. These Hamiltonians are not necessarily convex but they satisfy a certain…

Dynamical Systems · Mathematics 2008-02-03 Christopher Golé