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We study the statistics of the power flux into a collection of inelastic beads maintained in a fluidized steady-state by external mechanical driving. The power shows large fluctuations, including frequent large negative fluctuations, about…

Soft Condensed Matter · Physics 2007-05-23 Klebert Feitosa , Narayanan Menon

Standard results for the fluctuations of thermodynamic quantities are derived under the assumption of sampling identical systems that are in different, not fully equilibrated states. These results apply to fluctuations with time in a…

Mesoscale and Nanoscale Physics · Physics 2015-05-13 R. A. Serota

A computer simulation of thermofluctuation nucleation of kinks on dislocations and their dynamics is carried out in the framework of two-dimensional (2D) Frenkel-Kontorova model. It is shown that at relatively low temperatures and applied…

Materials Science · Physics 2009-11-07 Yu. N. Gornostyrev , M. I. Katsnelson , A. V. Kravtsov , A. V. Trefilov

In this paper we report direct measurement of large low frequency temperature fluctuations in double stranded (ds) DNA when it undergoes thermal denaturation transition. The fluctuation, which occurs only in the temperature range where the…

Statistical Mechanics · Physics 2007-05-23 K. S. Nagapriya , A. K. Raychaudhuri , Dipankar Chatterji

Diffusion processes are widespread in biological and chemical systems, where they play a fundamental role in the exchange of substances at the cellular level and in determining the rate of chemical reactions. Recently, the classical picture…

Soft Condensed Matter · Physics 2015-09-16 Roberto Cerbino , Yifei Sun , Aleksandar Donev , Alberto Vailati

The description of neutrino propagation through a fluctuating medium is summarized. Fluctuation-Dissipation-Theorem arguments relate microscopic fluctuations to thermodynamic quantities, allowing these to be very generally studied in…

High Energy Physics - Phenomenology · Physics 2016-09-06 C. P. Burgess

Topological defects are increasingly being identified in various biological systems, where their characteristic flow fields and stress patterns are associated with continuous active stress generation by biological entities. Here, using…

Soft Condensed Matter · Physics 2022-11-09 Lasse Bonn , Aleksandra Ardaseva , Romain Mueller , Tyler N. Shendruk , Amin Doostmohammadi

Chemical reactions in cell are subject to intense stochastic fluctuations. An important question is how the fundamental physiological behavior of cell is kept stable against those noisy perturbations. In this paper a stochastic model of…

Molecular Networks · Quantitative Biology 2009-11-13 Yurie Okabe , Masaki Sasai

We measure the energy fluctuations of a Brownian particle confined by an optical trap in an aging gelatin after a very fast quench (less than 1 ms). The strong nonequilibrium fluctuations due to the assemblage of the gel, are interpreted,…

Statistical Mechanics · Physics 2011-04-13 Juan Ruben Gomez-Solano , Artyom Petrosyan , Sergio Ciliberto

Living cells provide a fluctuating, out-of-equilibrium environment in which genes must coordinate cellular function. DNA looping, which is a common means of regulating transcription, is very much a stochastic process; the loops arise from…

Biomolecules · Quantitative Biology 2015-05-18 Yih-Fan Chen , J. N. Milstein , Jens-Christian Meiners

Information transmission in cells occurs quite accurately even when concentration changes are "read" by individual target molecules. In this Letter we study molecule number fluctuations when molecules diffuse and react. We show that, for…

Biological Physics · Physics 2014-12-17 Emiliano Pérez Ipiña , Silvina Ponce Dawson

We examine the dynamics of statistical fluctuations in nuclear matter. Linear response functions for the average phase space density are derived within Landau theory. Properties of the stochastic forces are deduced from the quantal…

Nuclear Theory · Physics 2009-10-28 Dieter Kiderlen , Helmut Hofmann

We investigate in this work the effects of interaction on the fluctuation of empirical measures. The systems with positive definite interaction potentials tend to exhibit smaller fluctuation compared to the fluctuation in standard Monte…

Probability · Mathematics 2022-04-19 Lei Li , Jiaheng Chen

A statistical model of homopolymer DNA, coupling internal base pair states (unbroken or broken) and external thermal chain fluctuations, is exactly solved using transfer kernel techniques. The dependence on temperature and DNA length of the…

Soft Condensed Matter · Physics 2007-08-29 J. Palmeri , M. Manghi , N. Destainville

It is well-known that stochastic processes on fractal spaces or in certain random media exhibit anomalous heat kernel behaviour. One manifestation of such irregular behaviour is the presence of fluctuations in the short- or long-time…

Probability · Mathematics 2023-10-18 Sebastian Andres , David Croydon , Takashi Kumagai

Biological functions in living cells are controlled by protein interaction and genetic networks. These molecular networks should be dynamically stable against various fluctuations which are inevitable in the living world. In this paper, we…

Molecular Networks · Quantitative Biology 2009-11-13 Yuping Zhang , Minping Qian , Qi Ouyang , Minghua Deng , Fangting Li , Chao Tang

Living cells exhibit an important out-of-equilibrium mechanical activity, mainly due to the forces generated by molecular motors. These motor proteins, acting individually or collectively on the cytoskeleton, contribute to the violation of…

Biological Physics · Physics 2009-01-21 Francois Gallet , Delphine Arcizet , Pierre Bohec , Alain Richert

Myosin motor proteins drive vigorous steady-state fluctuations in the actin cytoskeleton of cells. Endogenous embedded semiflexible filaments such as microtubules, or added filaments such as single-walled carbon nanotubes are used as novel…

Biological Physics · Physics 2016-06-21 J. Gladrow , N. Fakhri , F. C. MacKintosh , C. F. Schmidt , C. P. Broedersz

The non-equilibrium fluctuations of power flux in a fluidized granular media have been recently measured in an experiment [Phys. Rev. Lett. 92, 164301, 2004], which was announced to be a verification of the Fluctuation Relation (FR) by…

Statistical Mechanics · Physics 2007-05-23 A. Puglisi , P. Visco , A. Barrat , E. Trizac , F. van Wijland

Fluctuation theorems are fundamental results in non-equilibrium thermodynamics. Considering the fluctuation theorem with respect to the entropy production and an observable, we derive a new thermodynamic uncertainty relation which also…

Statistical Mechanics · Physics 2022-02-02 Gianluca Francica