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We theoretically investigate the membrane fluctuations of red blood cells with focus laid on the role of the cytoskeleton, viewing the system as a membrane coupled to sparse spring network. This model is exactly solvable and enables us to…

Soft Condensed Matter · Physics 2015-08-31 Wonjune Choi , Juyeon Yi , Yong Woon Kim

We review recent computer simulation studies of undulating lipid bilayers. Theoretical interpretations of such fluctuating membranes are most commonly based on generalized Helfrich-type elastic models, with additional contributions of local…

Biological Physics · Physics 2013-09-03 Friederike Schmid

A localized charged particle oscillating near a reflecting boundary is considered as a model for non-cancellation of vacuum fluctuations. Although the mean velocity of the particle is sinusoidal, the velocity variance produced by vacuum…

Quantum Physics · Physics 2011-12-06 Victor Parkinson , L. H. Ford

We study the joint effect of thermal bath fluctuations and an external noise tuning activity of cytotoxic cells on the triggered immune response in a growing cancerous tissue. The immune response is assumed to be primarily mediated by…

Populations and Evolution · Quantitative Biology 2015-06-26 Anna Ochab-Marcinek , Ewa Gudowska-Nowak

Cellular behavior is governed by gene regulatory processes that are intrinsically dynamic and nonlinear, and are subject to non-negligible amounts of random fluctuations. Such conditions are ubiquitous in physical systems, where they have…

Molecular Networks · Quantitative Biology 2011-09-21 Jordi Garcia-Ojalvo

Protein folding is a universal process, very fast and accurate, which works consistently (as it should be) in a wide range of physiological conditions. The present work is based on three premises, namely: ($i$) folding reaction is a process…

Biological Physics · Physics 2015-05-20 J. P. Dal Molin , M. A. A. da Silva , A. Caliri

Biochemical reactions are fundamentally noisy at a molecular scale. This limits the precision of reaction networks, but also allows fluctuation measurements which may reveal the structure and dynamics of the underlying biochemical network.…

Biological Physics · Physics 2018-04-11 Harmen Wierenga , Pieter Rein ten Wolde , Nils B. Becker

The effect of quantum fluctuations on a nearly flat, nonrelativistic two-dimensional membrane with extrinsic curvature stiffness and tension is investigated. The renormalization group analysis is carried out in first-order perturbative…

Condensed Matter · Physics 2009-10-31 M. E. S. Borelli , H. Kleinert , Adriaan M. J. Schakel

We investigate the role of thermal fluctuations and of the finite number of monomers in small clusters of carbon atoms on the nucleation rate of carbonaceous grains. Thermal fluctuations are due to the quantized nature of the energy…

Solar and Stellar Astrophysics · Physics 2015-05-19 Adam C. Keith , Davide Lazzati

We construct a dynamical model for the parton distributions in a nucleus by perturbative evolution of input distributions from a low starting scale. These input distributions are obtained by modifications of the corresponding free nucleon…

High Energy Physics - Phenomenology · Physics 2009-10-28 D. Indumathi , Wei Zhu

Gene regulatory dynamics is governed by molecular processes and therefore exhibits an inherent stochasticity. However, for the survival of an organism it is a strict necessity that this intrinsic noise does not prevent robust functioning of…

Molecular Networks · Quantitative Biology 2007-05-23 Stefan Braunewell , Stefan Bornholdt

Almost a century ago, Johnson and Nyquist presented evidence of fluctuating electrical current and the governing fluctuation dissipation theorem (FDT). Whether, likewise, temperature T can fluctuate is a controversial topic and has led to…

Mesoscale and Nanoscale Physics · Physics 2019-04-11 Bayan Karimi , Fredrik Brange , Peter Samuelsson , Jukka P. Pekola

In mesoscopic systems conductance fluctuations are a sensitive probe of electron dynamics and chaotic phenomena. We show that the conductance of a purely classical chaotic system with either fully chaotic or mixed phase space generically…

Mesoscale and Nanoscale Physics · Physics 2009-11-13 H. Hennig , R. Fleischmann , L. Hufnagel , T. Geisel

In development and homeostasis, multi-cellular systems exhibit spatial and temporal heterogeneity in their biochemical and mechanical properties. Nevertheless, it remains unclear how spatiotemporally heterogeneous forces affect the…

Soft Condensed Matter · Physics 2022-02-18 Takaki Yamamoto , Daniel M. Sussman , Tatsuo Shibata , M. Lisa Manning

"\textit{The noise is the signal}"[R. Landauer, Nature \textbf{392}, 658 (1998)] emphasizes the rich information content encoded in fluctuations. This paper assesses the dynamical role of fluctuations of a quantum system driven far from…

Quantum Physics · Physics 2015-03-10 Yi-Jen Chen , Stefan Pabst , Zheng Li , Oriol Vendrell , Robin Santra

Fluctuation theorems are a generalization of thermodynamics on small scales and provide the tools to characterize the fluctuations of thermodynamic quantities in non-equilibrium nanoscale systems. They are particularly important for…

Statistical Mechanics · Physics 2014-04-03 Jan Gieseler , Romain Quidant , Christoph Dellago , Lukas Novotny

Within a dynamical description of nuclear fragmentation, based on the liquid-gas phase transition scenario, we explore the relation between neutron-proton density fluctuations and nuclear symmetry energy. We show that, along the…

Nuclear Theory · Physics 2015-06-12 M. Colonna

We examine the effects of thermal fluctuations on thin elastic filaments with non-circular cross-section and arbitrary spontaneous curvature and torsion. Analytical expressions for orientational correlation functions and for the persistence…

Soft Condensed Matter · Physics 2009-10-31 S. Panyukov , Y. Rabin

Recent experiments in various cell types have shown that two-dimensional tissues often display local nematic order, with evidence of extensile stresses manifest in the dynamics of topological defects. Using a mesoscopic model where tissue…

Soft Condensed Matter · Physics 2021-03-30 Farzan Vafa , Mark J. Bowick , Boris I. Shraiman , M. Cristina Marchetti

The actomyosin cortex is an active material that provides animal cells with a strong but flexible exterior, whose mechanics, including non-Gaussian fluctuations and occasional large displacements or cytoquakes, have defied explanation. We…