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We consider the dependence of the electron transfer in photosynthetic complexes on correlation properties of random fluctuations of the protein environment. The electron subsystem is modeled by a finite network of connected electron…

Biological Physics · Physics 2015-06-23 Alexander I. Nesterov , Gennady P. Berman

Experimental evidence shows that a variety of photosynthetic systems can preserve quantum beats in the process of electronic energy transfer, even at room temperature. However, whether this quantum coherence arises in vivo and whether it…

Quantum Physics · Physics 2012-10-22 Stephan Hoyer , Akihito Ishizaki , K. Birgitta Whaley

We study dynamics of quantum open systems, paying special attention to those aspects of their evolution which are relevant to the transition from quantum to classical. We begin with a discussion of the conditional dynamics of simple…

Quantum Physics · Physics 2015-06-26 Juan Pablo Paz , Wojciech Hubert Zurek

We provide a theoretical framework to describe the nonequilibrium temporal dynamics of correlated electron systems for realistic system parameters and the consequent, often exponentially long time scales. It is based on an entirely…

Strongly Correlated Electrons · Physics 2026-05-29 Francisco Meirinhos , Michael Turaev , Michael Kajan , Tim Bode , Johann Kroha

In this article, we explore the dynamical decoherence of the chromophores within a green fluorescent protein when coupled to a finite-temperature dielectric environment. Such systems are of significant interest due to their anomalously long…

Chemical Physics · Physics 2024-05-08 Adam Burgess , Marian Florescu

We show that finite-size, disordered molecular networks can mediate highly efficient, coherent excitation transfer which is robust against ambient dephasing and associated with strong multi-site entanglement. Such optimal, random molecular…

The functioning and efficiency of natural photosynthetic complexes is strongly influenced by their embedding in a noisy protein environment, which can even serve to enhance the transport efficiency. Interactions with the environment induce…

Biological Physics · Physics 2015-06-03 Sebastiaan M. Vlaming , Robert J. Silbey

This paper studies the energy decoherence of an interacting quantum system. It first reviews the experiments that motivated the postulates of quantum mechanics. It then discusses a decoherence that occurs dynamically in a closed system.…

Quantum Physics · Physics 2024-12-03 Henry Crumley

The spontaneous decay of an excited atom by photon emission is one of the most common and elementary physical process present in nature and in laboratories. The decay is random in time with constant probability density, as it can be…

Quantum Physics · Physics 2025-11-25 Marcello Baldo

We consider continuum dielectric models as minimal models to understand the effect of a surrounding globular protein and solvent on the quantum dynamics of electronic excitations in a biological chromophore. We derive expressions for the…

Quantum Physics · Physics 2007-06-25 Joel Gilmore , Ross H. McKenzie

We examine a biomolecular machine involving a driven, observable process coupled to a hidden process in a kinetically cooperative manner. A stochastic thermodynamics framework is employed to analyze a fluctuation theorem for the…

Statistical Mechanics · Physics 2025-11-14 D. Evan Piephoff , Jianshu Cao

In orthodox quantum theory, decoherence is presumed to be caused by observation. In this paper, the idea of replacing observation, as the cause of decoherence, with rules derived from the dynamics of the system is addressed. Such rules…

Quantum Physics · Physics 2007-05-23 Thomas L. Cooper

Excitonic transport in photosynthesis exhibits a wide range of time scales. Absorption and initial relaxation takes place over tens of femtoseconds. Excitonic lifetimes are on the order of a nanosecond. Hopping rates, energy differences…

Quantum Physics · Physics 2011-11-22 Seth Lloyd , Masoud Mohseni , Alireza Shabani , Herschel Rabitz

Advancing the debate on quantum effects in light-initiated reactions in biology requires clear identification of non-classical features that these processes can exhibit and utilise. Here we show that in prototype dimers present in a variety…

Quantum Physics · Physics 2014-01-10 Edward J. O'Reilly , Alexandra Olaya-Castro

Decoherence of a quantum system (which then starts to display classical features) results from the interaction of the system with the environment, and is well described in the framework of the theory of continuous quantum measurements…

Quantum Physics · Physics 2010-12-17 Michael B. Mensky

The conditions under which an open quantum mechanical system may be described by mixed quantum-classical dynamics are investigated. Decoherence is studied using influence functional methods in a model composite quantum system comprising two…

Mesoscale and Nanoscale Physics · Physics 2009-11-07 Kazutomu Shiokawa , Raymond Kapral

The exciton dynamics in a molecular heterodimer is studied as a function of differences in excitation and reorganization energies, asymmetry in transition dipole moments and excited state lifetimes. The heterodimer is composed of two…

Chemical Physics · Physics 2015-06-03 V. Balevicius , A. Gelzinis , D. Abramavicius , T. Mancal , L. Valkunas

A measurement of the time between quantum jumps implies the capability to measure the next jump. During the time between jumps the quantum system is not evolving in a closed or unitary manner. While the wave function maintains phase…

Quantum Physics · Physics 2023-07-05 Massimo Porrati , Seth Putterman

A non-trivial interplay between quantum coherence and dissipative environment-driven dynamics is becoming increasingly recognised as key for efficient energy transport in photosynthetic pigment-protein complexes, and converting these…

Quantum Physics · Physics 2013-03-19 M. del Rey , A. W. Chin , S. F. Huelga , M. B. Plenio

Attochemistry aims to exploit the properties of coherent electronic wavepackets excited via attosecond pulses, to control the formation of photoproducts. Such molecular processes can in principle be simulated with various nonadiabatic…

Chemical Physics · Physics 2024-05-28 Thierry Tran , Anthony Ferté , Morgane Vacher