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Characterizing motif (i.e., locally connected subgraph patterns) statistics is important for understanding complex networks such as online social networks and communication networks. Previous work made the strong assumption that the graph…

Social and Information Networks · Computer Science 2015-02-25 Pinghui Wang , John C. S. Lui , Don Towsley

A class of models that have been widely used are the exponential random graph (ERG) models, which form a comprehensive family of models that include independent and dyadic edge models, Markov random graphs, and many other graph…

Statistics Theory · Mathematics 2022-02-07 Denise Duarte , Rafael Honório Pereira Alves

Spatio-temporal network dynamics is an emergent property of many complex systems which remains poorly understood. We suggest a new approach to its study based on the analysis of dynamical motifs -- small subnetworks with periodic and…

Disordered Systems and Neural Networks · Physics 2007-05-23 Valentin P. Zhigulin

Network motifs can capture basic interaction patterns and inform the functional properties of networks. However, real-world complex systems often have multiple types of relationships, which cannot be represented by a monolayer network. The…

Physics and Society · Physics 2019-03-06 Lu Zhong , Qingpeng Zhang , Dong Yang , Guanrong Chen , Shi Yu

Exponential-family random graph models (ERGMs) are probabilistic network models that are parametrized by sufficient statistics based on structural (i.e., graph-theoretic) properties. The ergm package for the R statistical computing system…

Social and Information Networks · Computer Science 2015-06-24 Omer Nebil Yaveroglu , Sean M. Fitzhugh , Maciej Kurant , Athina Markopoulou , Carter T. Butts , Natasa Przulj

Designing algorithms that generate networks with a given degree sequence while varying both subgraph composition and distribution of subgraphs around nodes is an important but challenging research problem. Current algorithms lack control of…

Physics and Society · Physics 2015-12-07 Martin Ritchie , Luc Berthouze , Istvan Z Kiss

Interaction networks are of central importance in post-genomic molecular biology, with increasing amounts of data becoming available by high-throughput methods. Examples are gene regulatory networks or protein interaction maps. The main…

Statistical Mechanics · Physics 2009-11-10 Johannes Berg , Michael Lässig

This paper looks at the task of network topology inference, where the goal is to learn an unknown graph from nodal observations. One of the novelties of the approach put forth is the consideration of prior information about the density of…

Signal Processing · Electrical Eng. & Systems 2022-07-12 Samuel Rey , T. Mitchell Roddenberry , Santiago Segarra , Antonio G. Marques

Not all nodes in a network are created equal. Differences and similarities exist at both individual node and group levels. Disentangling single node from group properties is crucial for network modeling and structural inference. Based on…

Statistical Mechanics · Physics 2015-05-20 Joerg Reichardt , Roberto Alamino , David Saad

Exponential random graph models (ERGMs), also known as p* models, have been utilized extensively in the social science literature to study complex networks and how their global structure depends on underlying structural components. However,…

Applications · Statistics 2015-05-19 Sean L. Simpson , Satoru Hayasaka , Paul J. Laurienti

We develop new methods based on graph motifs for graph clustering, allowing more efficient detection of communities within networks. We focus on triangles within graphs, but our techniques extend to other clique motifs as well. Our…

Data Structures and Algorithms · Computer Science 2017-02-07 Charalampos Tsourakakis , Jakub Pachocki , Michael Mitzenmacher

A great variety of complex systems ranging from user interactions in communication networks to transactions in financial markets can be modeled as temporal graphs, which consist of a set of vertices and a series of timestamped and directed…

Social and Information Networks · Computer Science 2020-07-29 Jingjing Wang , Yanhao Wang , Wenjun Jiang , Yuchen Li , Kian-Lee Tan

Complex systems frequently exhibit multi-way, rather than pairwise, interactions. These group interactions cannot be faithfully modeled as collections of pairwise interactions using graphs and instead require hypergraphs. However, methods…

Discrete Mathematics · Computer Science 2024-11-25 Jason Niu , Ilya D. Amburg , Sinan G. Aksoy , Ahmet Erdem Sarıyüce

Investigating the frequency and distribution of small subgraphs with a few nodes/edges, i.e., motifs, is an effective analysis method for static networks. Motif-driven analysis is also useful for temporal networks where the spectrum of…

Social and Information Networks · Computer Science 2021-05-04 Penghang Liu , Valerio Guarrasi , A. Erdem Sarıyüce

A growing set of applications consider the process of network formation by using subgraphs as a tool for generating the network topology. One of the pressing research challenges is thus to be able to use these subgraphs to understand the…

Social and Information Networks · Computer Science 2019-04-11 Soumajyoti Sarkar , Hamidreza Alvari , Paulo Shakarian

Network homophily, the tendency of similar nodes to be connected, and transitivity, the tendency of two nodes being connected if they share a common neighbor, are conflated properties in network analysis, since one mechanism can drive the…

Social and Information Networks · Computer Science 2022-01-07 Tiago P. Peixoto

This paper addresses the question of whether it is possible to generate networks with a given global structure (defined by selected blockmodels, i.e., cohesive, core-periphery, hierarchical and transitivity), considering only different…

Statistics Theory · Mathematics 2018-07-04 Marjan Cugmas , Anuška Ferligoj , Aleš Žiberna

Disease spreading models such as the ubiquitous SIS compartmental model and its numerous variants are widely used to understand and predict the behaviour of a given epidemic or information diffusion process. A common approach to imbue more…

Dynamical Systems · Mathematics 2025-11-18 Eugene Tan , Michael Small , Shannon D. Algar

Triadic subgraph analysis reveals the structural features in power networks based on higher-order connectivity patterns. Power networks have a unique triad significance profile (TSP) of the five unidirectional triadic subgraphs in…

Physics and Society · Physics 2022-11-09 Hao Liu , Xin Chen , Long Huo , Chunming Niu

Traditional network analysis focuses on binary edges, while real-world relationships are more nuanced, encompassing cooperation, neutrality, and conflict. The rise of negative edges in social media discussions spurred interest in analyzing…

Social and Information Networks · Computer Science 2026-02-03 Marc Schalberger , Cornelius Fritz