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Systems Biology has emerged in the last years as a new holistic approach based on the global understanding of cells instead of only being focused on their individual parts (genes or proteins), to better understand the complexity of human…

Quantum Biology is emerging as a new field at the intersection between fundamental physics and biology, promising novel insights into the nature and origin of biological order. We discuss several elements of QBCL (Quantum Biology at…

Other Quantitative Biology · Quantitative Biology 2013-04-04 Michael Bordonaro , Vasily Ogryzko

Social evolutionary theory seeks to explain increases in the scale and complexity of human societies, from origins to present. Over the course of the twentieth century, social evolutionary theory largely fell out of favor as a way of…

Multiagent Systems · Computer Science 2025-02-27 David H. Wolpert , Kyle Harper

The hypercomputers compute functions or numbers, or more generally solve problems or carry out tasks, that cannot be computed or solved by a Turing machine. Several numerical simulations of a possible hypercomputational algorithm based on…

Quantum Physics · Physics 2007-05-23 Andrés Sicard , Juan Ospina , Mario Vélez

Since the turn of the millennium, computational modelling of biological systems has evolved remarkably and sees matured use spanning basic and clinical research. While the topic of the peri-millennial debate about the virtues and…

Quantitative Methods · Quantitative Biology 2025-08-05 Axel Loewe , Peter J. Hunter , Peter Kohl

The physiological tradition of biological research analyzes biological systems using reduced descriptions much as an engineer uses a 'black box' description of an amplifier. Simple models have been used by physiologists for a very long…

Other Quantitative Biology · Quantitative Biology 2012-07-06 Bob Eisenberg

Computational models are invaluable in capturing the complexities of real-world biological processes. Yet, the selection of appropriate algorithms for inference tasks, especially when dealing with real-world observational data, remains a…

Applications · Statistics 2024-10-01 Xiaoyu Wang , Ryan P. Kelly , Adrianne L. Jenner , David J. Warne , Christopher Drovandi

The Turing machine is one of the simple abstract computational devices that can be used to investigate the limits of computability. In this paper, they are considered from several points of view that emphasize the importance and the…

Computational Complexity · Computer Science 2012-03-16 Yaroslav D. Sergeyev , Alfredo Garro

A modeling formalism is proposed for the description and study of living and life-like systems. It provides an abstract conceptual model framework for real life and evolution of biological organisms. It is proposed, that this model…

Populations and Evolution · Quantitative Biology 2013-06-14 Margareta Segerståhl

Digital life, a form of life generated by computer programs or artificial intelligence systems, it possesses self-awareness, thinking abilities, emotions, and subjective consciousness. Achieving it involves complex neural networks,…

Human-Computer Interaction · Computer Science 2023-10-24 Qikang Zhang

We clarify the confusion, misunderstanding and misconception that the physical finiteness of the universe, if the universe is indeed finite, would rule out all hypercomputation, the kind of computation that exceeds the Turing computability,…

Quantum Physics · Physics 2007-05-23 Tien D. Kieu

Applying the lens of computation and information has been instrumental in driving the technological progress of our civilization as well as in empowering our understanding of the world around us. The digital computer was and for many still…

Robotics · Computer Science 2025-12-30 Matej Hoffmann

With traditional computing technologies reaching their limit, a new field has emerged seeking to follow the example of the human brain into a new era: neuromorphic computing. This paper provides an introduction to neuromorphic computing,…

Neural and Evolutionary Computing · Computer Science 2025-10-20 Benedikt Jung , Maximilian Kalcher , Merlin Marinova , Piper Powell , Esma Sakalli

Do quantum computers already exist in Nature? It is proposed that they do. Photosynthesis is one example in which a 'quantum computer' component may play a role in the 'classical' world of complex biological systems. A 'translation' of the…

Quantum Physics · Physics 2007-05-23 Scott M. Hitchcock

Computational functionalism posits that consciousness is a computation. Here we show, perhaps surprisingly, that it cannot be a Turing computation. Rather, computational functionalism implies that consciousness is a novel type of…

Neurons and Cognition · Quantitative Biology 2024-03-07 Johannes Kleiner

Increasing emphasis on data and quantitative methods in the biomedical sciences is making biological research more computational. Collecting, curating, processing, and analysing large genomic and imaging data sets poses major computational…

Quantitative Methods · Quantitative Biology 2021-09-22 Elisabeth Roesch , Joe G. Greener , Adam L. MacLean , Huda Nassar , Christopher Rackauckas , Timothy E. Holy , Michael P. H. Stumpf

The term `hypermachine' denotes any data processing device (theoretical or that can be implemented) capable of carrying out tasks that cannot be performed by a Turing machine. We present a possible quantum algorithm for a classically…

Quantum Physics · Physics 2009-11-10 Andrés Sicard , Mario Vélez , Juan Ospina

A coherent mathematical overview of computation and its generalisations is described. This conceptual framework is sufficient to comfortably host a wide range of contemporary thinking on embodied computation and its models.

Logic in Computer Science · Computer Science 2013-03-12 S. Barry Cooper

The relationship between brains and computers is often taken to be merely metaphorical. However, genuine computational systems can be implemented in virtually any media; thus, one can take seriously the view that brains literally compute.…

Neurons and Cognition · Quantitative Biology 2022-08-26 Corey J. Maley

With the rise of computers, simulation models have emerged beside the more traditional statistical and mathematical models as a third pillar for ecological analysis. Broadly speaking, a simulation model is an algorithm, typically…

Populations and Evolution · Quantitative Biology 2018-12-24 Florian Hartig
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