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Related papers: Influenza Virus Vaccine Efficacy Based On Conserve…

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How important is resource depletion (e.g. depletion of target cells) in controlling infection within a host? And how can we distinguish between resource depletion and other mechanisms that may contribute to decline of pathogen load or lead…

Cell Behavior · Quantitative Biology 2017-05-09 Hasan Ahmed , James Moore , Balaji Manicassamy , Adolfo Garcia-Sastre , Andreas Handel , Rustom Antia

The immune system is a real-time example of an evolving system that navigates the essentially infinite complexity of protein sequence space. How this system responds to disease and vaccination is discussed. Of particular focus is the case…

Cell Behavior · Quantitative Biology 2007-05-23 Michael W. Deem

Background: The pandemic of influenza A (H1N1) is a serious on-going global public crisis. Understanding its spreading dynamics is of fundamental importance for both public health and scientific researches. Recent studies have focused…

Physics and Society · Physics 2015-03-13 Xiao-Pu Han , Bing-Hong Wang , Chang-Song Zhou , Tao Zhou , Jun-Fang Zhu

Background: To prevent future outbreaks of COVID-19, Australia is pursuing a mass-vaccination approach in which a targeted group of the population comprising healthcare workers, aged-care residents and other individuals at increased risk of…

Populations and Evolution · Quantitative Biology 2021-08-09 Cameron Zachreson , Sheryl L. Chang , Oliver M. Cliff , Mikhail Prokopenko

Traditional measures of vaccine efficacy (VE) are inherently asymmetric, constrained above by $1$ but unbounded below. As a result, VE estimates and corresponding confidence intervals can extend far below zero, making interpretation…

Methodology · Statistics 2025-12-09 Lucy D'Agostino McGowan , Sarah C. Lotspeich , Michael G. Hudgens

The evolutionary dynamics of human Influenza A virus presents a challenging theoretical problem. An extremely high mutation rate allows the virus to escape, at each epidemic season, the host immune protection elicited by previous…

Populations and Evolution · Quantitative Biology 2016-11-30 Lorenzo Taggi , Francesca Colaiori , Vittorio Loreto , Francesca Tria

This study focuses on the modeling, mathematical analysis, developing theories, and numerical simulation of Influenza virus transmission. We have proved the existence, uniqueness, positivity, and boundedness of the solutions. Also,…

Populations and Evolution · Quantitative Biology 2024-03-19 Kazi Mehedi Mohammad , Asma Akter Akhi , Md. Kamrujjaman

Mass vaccination produces a reduction in virus circulation, but also evolutive pressure towards the appearance of virus-resistant strains. We discuss the balance between these two effects, in particular when the mass vaccination takes place…

Populations and Evolution · Quantitative Biology 2022-03-02 Giuseppe Gaeta

Incorporating vaccination into mathematical models appears deceptively simple: models integrate vaccine-derived protections, such as reduced susceptibility to infection, using parameters informed by empirical estimates of vaccine efficacy…

Populations and Evolution · Quantitative Biology 2026-05-19 Casey E. Middleton , Oliver Eales , James M. McCaw , Freya M. Shearer

With a simple phenomenological metapopulation model, which characterizes the invasion process of an influenza pandemic from a source to a subpopulation at risk, we compare the efficiency of inter- and intra-population interventions in…

Physics and Society · Physics 2012-09-27 Lin Wang , Yan Zhang , Tianyi Huang , Xiang Li

Influenza poses a significant threat to public health, particularly among the elderly, young children, and people with underlying dis-eases. The manifestation of severe conditions, such as pneumonia, highlights the importance of preventing…

Machine Learning · Computer Science 2024-02-23 Yanhua Xu , Dominik Wojtczak

We propose a new method to immunize populations or computer networks against epidemics which is more efficient than any method considered before. The novelty of our method resides in the way of determining the immunization targets. First we…

Physics and Society · Physics 2015-06-03 Christian M. Schneider , Tamara Mihaljev , Hans J. Herrmann

Historically, infectious diseases caused considerable damage to human societies, and they continue to do so today. To help reduce their impact, mathematical models of disease transmission have been studied to help understand disease…

For nearly a century, the initial reproduction number (R0) has been used as a one number summary to compare outbreaks of infectious disease, yet there is no `standard' estimator for R0. Difficulties in estimating R0 arise both from how a…

Populations and Evolution · Quantitative Biology 2020-03-25 Shannon Gallagher , Andersen Chang , William F. Eddy

Herd immunity is shaped not only by the infection capacity of a spreading epidemic or the contact structure of the hosting population, but also by how and under what circumstances individuals acquire immunity. Immunization strategies may…

Physics and Society · Physics 2026-02-20 Sámuel G. Balogh , Gergely Ódor , Márton Karsai

Understanding how genetic changes allow emerging virus strains to escape the protection afforded by vaccination is vital for the maintenance of effective vaccines. In the current work, we use structural and phylogenetic differences between…

Applications · Statistics 2019-05-14 Vinny Davies , William T. Harvey , Richard Reeve , Dirk Husmeier

Process mining is a discipline sitting between data mining and process science, whose goal is to provide theoretical methods and software tools to analyse process execution data, known as event logs. Although process mining was originally…

Databases · Computer Science 2021-12-13 Adriano Augusto , Timothy Deitz , Noel Faux , Jo-Anne Manski-Nankervis , Daniel Capurro

Epidemic control frequently relies on adjusting interventions based on prevalence. But designing such policies is a highly non-trivial problem due to uncertain intervention effects, costs and the difficulty of quantifying key transmission…

Populations and Evolution · Quantitative Biology 2025-09-16 Giovanni Pugliese Carratelli , Xiaodong Cheng , Kris V. Parag , Ioannis Lestas

We review vaccine efficacy (VE) estimands for susceptibility in individual randomized trials with natural (unmeasured) exposure, where individual responses are measured as time from vaccination until an event (e.g., disease from the…

Methodology · Statistics 2026-01-27 Michael P. Fay , Dean Follmann , Bruce J. Swihart , Lauren E. Dang

To mitigate the pandemic stemming from COVID-19, numerous nations have initiated extensive vaccination campaigns for their citizens since late 2020. While affluent countries have predominantly received vaccine allocations, fewer doses have…

Physics and Society · Physics 2024-04-01 Hsin-Ju Chou , Jing-Yuan Ko , Sung-Po Chao