Related papers: A phase transition in energy-filtered RNA secondar…
In this paper, we will analyze the short distance corrections to low energy scattering. They are produced because of an intrinsic extended structure of the background geometry of spacetime. It will be observed that the deformation produced…
Griffith's energetic criterion, or `energy balance', has for a century formed the basis for fracture mechanics; the energy flowing into a crack front is precisely balanced by the dissipation (fracture energy) at the front. If the crack…
We develop a 1D model of twin branching in shape memory alloys. The free energy of the branched microstructure comprises the interfacial and elastic strain energy contributions, both expressed in terms of the average twin spacing treated as…
A free-energy functional that contains both the symmetry conserved and symmetry broken parts of the direct pair correlation function has been used to investigate the freezing of a system of hard spheres into crystalline and amorphous…
RNAs are negatively charged molecules residing in macromolecular crowding cellular environments. Macromolecular confinement can influence the ion effects in RNA folding. In this work, using the recently developed tightly bound ion model for…
While the high-temperature spin diffusion in spin chains with random local fields has been the subject of numerous studies concerning the phenomenon of many-body localization (MBL), the energy diffusion in the same models has been much less…
In this work we model the evolution of strain energy during different growth stages of heterostructure nanowires. We find that the minimum energy configuration changes abruptly from fully elastically strained to partially relaxed due to…
The variation with energy of the total cross section for elastic electron scattering from atoms of several elements is caused primarily by shape resonances corresponding to the formation of temporary negative ions. It is shown that such…
Topological defects in low-dimensional non-linear systems feature a sliding-to-pinning transition of relevance for a variety of research fields, ranging from biophysics to nano- and solid-state physics. We find that the dynamics after a…
We derive equations of motion for the reduced density matrix of a molecular system which undergoes energy transfer dynamics competing with fast internal conversion channels. Environmental degrees of freedom of such a system have no time to…
A finite (periodic) FPU chain is chosen as a convenient point for investigating the energy exchange phenomenon in nonlinear oscillatory systems. As we have recently shown, this phenomenon may occur as a consequence of the resonant…
The effect of topology on the collapse transition and instantaneous shape of an energy polydisperse polymer (a model heteropolymer) is studied by means of computer simulations. In particular, we consider three different chain topology,…
The scattering of electromagnetic waves by subwavelength rectangular grooves has been extensively studied, yet its physical interpretation has largely relied on field-intensity distributions. Here we demonstrate that the transition from…
Background: Genotype-phenotype maps provide a meaningful filtration of sequence space and RNA secondary structures are particular such phenotypes. Compatible sequences i.e.~sequences that satisfy the base pairing constraints of a given RNA…
We study the possibility to apply phenomenological approach to the description of magnetic transitions in UGe$_2$ at ambient pressure with the help of Landau free energy expanded to 8th order in magnetisation. The analysis shows that for…
Material functionality can be strongly determined by structure extending only over nanoscale distances. The pair distribution function presents an opportunity to shift structural studies beyond idealized crystal models and investigate…
We study the folding of RNA secondary structures with quenched sequence randomness by means of the constrained annealing method. A thermodynamic phase transition is induced by including the conformational weight of loop structures. In…
We analytically study the time-averaged electromagnetic energy stored inside scatterers containing inclusions of arbitrary shapes. Assuming the low density of inclusions, we derive the expression for the energy-transport velocity through…
Characterizing distinct electron wave packets is a basic task for solid-state electron quantum optics with applications in quantum metrology and sensing. A important circuit element for this task is a non-stationary potential barrier than…
The energy loss behaviour of fission fragments (FF) from $^{252}$Cf(sf) in thin Mylar ($H_8 C_{10} O_4$) and Aluminium absorber foils have been revisited. The aim is to investigate the observed change in the well known asymmetric energy of…