English
Related papers

Related papers: Using the Gene Ontology Hierarchy when Predicting …

200 papers

Data quality on categorical attribute is a difficult problem that has not received as much attention as numerical counterpart. Our basic idea is to employ association rule for the purpose of data quality measurement. Strong rule generation…

Databases · Computer Science 2012-02-16 J. Malar Vizhi , T. Bhuvaneswari

Most information in our world is organized hierarchically; however, many Deep Learning approaches do not leverage this semantically rich structure. Research suggests that human learning benefits from exploiting the hierarchical structure of…

Computer Vision and Pattern Recognition · Computer Science 2026-03-03 Alexandru Manole , Laura Diosan

Modeling the dependence between outputs is a fundamental challenge in multilabel classification. In this work we show that a generic regularized nonlinearity mapping independent predictions to joint predictions is sufficient to achieve…

Machine Learning · Computer Science 2015-04-22 Nikos Karampatziakis , Paul Mineiro

Multi-label text classification is a challenging task because it requires capturing label dependencies. It becomes even more challenging when class distribution is long-tailed. Resampling and re-weighting are common approaches used for…

Computation and Language · Computer Science 2021-10-19 Yi Huang , Buse Giledereli , Abdullatif Köksal , Arzucan Özgür , Elif Ozkirimli

The inference of gene regulatory networks from high throughput gene expression data is one of the major challenges in systems biology. This paper aims at analysing and comparing two different algorithmic approaches. The first approach uses…

Quantitative Methods · Quantitative Biology 2008-12-05 A. Braunstein , A. Pagnani , M. Weigt , R. Zecchina

Learning to rank has recently emerged as an attractive technique to train deep convolutional neural networks for various computer vision tasks. Pairwise ranking, in particular, has been successful in multi-label image classification,…

Computer Vision and Pattern Recognition · Computer Science 2017-06-02 Yuncheng Li , Yale Song , Jiebo Luo

Multi-task learning in text classification leverages implicit correlations among related tasks to extract common features and yield performance gains. However, most previous works treat labels of each task as independent and meaningless…

Computation and Language · Computer Science 2017-10-20 Honglun Zhang , Liqiang Xiao , Wenqing Chen , Yongkun Wang , Yaohui Jin

Unlike the typical classification setting where each instance is associated with a single class, in multi-label learning each instance is associated with multiple classes simultaneously. Therefore the learning task in this setting is to…

Machine Learning · Computer Science 2022-11-30 Harris Papadopoulos

Classification is one of the most important tasks in Machine Learning (ML) and with recent advancements in artificial intelligence (AI) it is important to find efficient ways to implement it. Generally, the choice of classification…

Machine Learning · Computer Science 2023-12-27 Anuja Dixit , Shreya Byreddy , Guanqun Song , Ting Zhu

Optimization problems frequently appear in any scientific domain. Most of the times, the corresponding decision problem turns out to be NP-hard, and in these cases genetic algorithms are often used to obtain approximated solutions. However,…

Neural and Evolutionary Computing · Computer Science 2024-02-02 Alba Muñoz , Fernando Rubio

We applied machine learning to predict whether a gene is involved in axon regeneration. We extracted 31 features from different databases and trained five machine learning models. Our optimal model, a Random Forest Classifier with 50…

Machine Learning · Computer Science 2019-09-27 Haoze Wu , Yangyu Zhou

It is well-known that exploiting label correlations is crucially important to multi-label learning. Most of the existing approaches take label correlations as prior knowledge, which may not correctly characterize the real relationships…

Machine Learning · Computer Science 2019-02-11 Lei Feng , Bo An , Shuo He

Current contrastive learning frameworks focus on leveraging a single supervisory signal to learn representations, which limits the efficacy on unseen data and downstream tasks. In this paper, we present a hierarchical multi-label…

Computer Vision and Pattern Recognition · Computer Science 2022-04-29 Shu Zhang , Ran Xu , Caiming Xiong , Chetan Ramaiah

Automated decision support systems promise to help human experts solve multiclass classification tasks more efficiently and accurately. However, existing systems typically require experts to understand when to cede agency to the system or…

Machine Learning · Computer Science 2023-07-03 Eleni Straitouri , Lequn Wang , Nastaran Okati , Manuel Gomez Rodriguez

Multi-label classification (MLC) is an important class of machine learning problems that come with a wide spectrum of applications, each demanding a possibly different evaluation criterion. When solving the MLC problems, we generally expect…

Machine Learning · Computer Science 2019-10-08 Yao-Yuan Yang , Yi-An Lin , Hong-Min Chu , Hsuan-Tien Lin

We propose a novel method for hierarchical entity classification that embraces ontological structure at both training and during prediction. At training, our novel multi-level learning-to-rank loss compares positive types against negative…

Computation and Language · Computer Science 2020-04-07 Tongfei Chen , Yunmo Chen , Benjamin Van Durme

Algorithmic classifications of research publications can be used to study many different aspects of the science system, such as the organization of science into fields, the growth of fields, interdisciplinarity, and emerging topics. How to…

Digital Libraries · Computer Science 2021-01-01 Peter Sjögårde , Per Ahlgren , Ludo Waltman

Automated Machine Learning (AutoML) has emerged to deal with the selection and configuration of algorithms for a given learning task. With the progression of AutoML, several effective methods were introduced, especially for traditional…

Machine Learning · Computer Science 2020-08-03 Alex G. C. de Sá , Cristiano G. Pimenta , Gisele L. Pappa , Alex A. Freitas

In this paper, we present a learning method for sequence labeling tasks in which each example sequence has multiple label sequences. Our method learns multiple models, one model for each label sequence. Each model computes the joint…

Machine Learning · Computer Science 2016-05-10 Arvind Agarwal , Saurabh Kataria

Label hierarchies are often available apriori as part of biological taxonomy or language datasets WordNet. Several works exploit these to learn hierarchy aware features in order to improve the classifier to make semantically meaningful…

Computer Vision and Pattern Recognition · Computer Science 2022-07-27 Ashima Garg , Depanshu Sani , Saket Anand