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Related papers: Routing Physarum with electrical flow/current

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Many studies have shown that Physarum polycephalum slime mold is able to find the shortest path in a maze. In this paper we study this behavior in a network, using a hyperbolic model of chemotaxis. Suitable transmission and boundary…

Numerical Analysis · Mathematics 2016-01-07 Gabriella Bretti , Roberto Natalini

Bacterial swarming is a rapid mass-migration, in which thousands of cells spread collectively to colonize a surface. Physically, swarming is a natural example of active particles that use energy to generate motion. Accordingly,…

Soft Condensed Matter · Physics 2019-11-14 Avraham Be`er , Bella Ilkanaiv , Renan Gross , Daniel B. Kearns , Sebastian Heidenreich , Markus Bär , Gil Ariel

The spatial localization or sequestering of motile cargo and their dispersal within cells is an important process in a number of physiological contexts. The morphology of the cytoskeletal network, along which active, motor-driven…

Biological Physics · Physics 2019-07-16 Bryan Maelfeyt , Ajay Gopinathan

How do non-neural organisms, such as the slime mould \textit{Physarum polycephalum}, anticipate periodic events in their environment? We present a minimal, biologically inspired reservoir model that demonstrates simple temporal anticipation…

Neurons and Cognition · Quantitative Biology 2025-05-06 Polyphony Bruna , Linnéa Gyllingberg

Slime mould \emph{Physarum polycephalum} is a large single cell capable for distributed sensing, concurrent information processing, parallel computation and decentralised actuation. The ease of culturing and experimenting with Physarum…

Emerging Technologies · Computer Science 2015-12-29 Andrew Adamatzky

The acoustofluidic method holds great promise for manipulating microorganisms. When exposed to the steady vortex structures of acoustic streaming flow, these microorganisms exhibit intriguing dynamic behaviors, such as hydrodynamic trapping…

Fluid Dynamics · Physics 2025-04-25 Xuyang Sun , Wenchang Tan , Yi Man

Intracellular transport is essential for maintaining proper cellular function in most eukaryotic cells, with perturbations in active transport resulting in several types of disease. Efficient delivery of critical cargos to specific…

Biological Physics · Physics 2016-08-16 David Ando , Nickolay Korabel , Kerwyn Casey Huang , Ajay Gopinathan

Branched flow governs the transition from ballistic to diffusive motion of waves and conservative particle flows in spatially correlated random or complex environments. It occurs in many physical systems from micrometer to interstellar…

Biological Physics · Physics 2023-11-29 King Hang Mok , Ragnar Fleischmann

In this paper we study crawling locomotion based on directional frictional interactions, namely, frictional forces that are sensitive to the sign of the sliding velocity. Surface interactions of this type are common in biology, where they…

Mathematical Physics · Physics 2015-03-31 Paolo Gidoni , Giovanni Noselli , Antonio DeSimone

It is now widely accepted that one of the roles of the hippocampus is to maintain episodic spatial representations, while parallel striatal pathways contribute to both declarative and procedural value computations by encoding different…

Neurons and Cognition · Quantitative Biology 2014-12-10 Fabian Chersi

Inspired by the growth dynamics of the protist \textit{Physarum polycephalum}, we employ a formalism that describes adaptive, incompressible Hagen-Poiseuille flows on channel networks to identify graphs connecting different nodes within…

Physics and Society · Physics 2025-07-18 Rodrigo Almeida , Ana Filipa Valente , Rui Dilão

Management of communication by on-line routing in new FPGAs with a large amount of logic resources and partial reconfigurability is a new challenging problem. A Network-on-Chip (NoC) typically uses packet routing mechanism, which has often…

Hardware Architecture · Computer Science 2016-08-31 Ali Ahmadinia , Christophe Bobda , Ji Ding , Mateusz Majer , Juergen Teich , Sandor P. Fekete , Jan van der Veen

A novel mechanism for the transport of microscale particles in viscous fluids is demonstrated. The mechanism exploits the trapping of such particles by rotational streaming cells established in the vicinity of an oscillating cylinder,…

Fluid Dynamics · Physics 2016-01-13 Kwitae Chong , Scott D. Kelly , Stuart T. Smith , Jeff D. Eldredge

Cells control fluid flows with a spatial and temporal precision that far exceeds the capabilities of current microfluidic technologies. Cells achieve this superior spatio-temporal control by harnessing dynamic networks of cytoskeleton and…

Soft Condensed Matter · Physics 2025-05-26 Fan Yang , Shichen Liu , Heun Jin Lee , Rob Phillips , Matt Thomson

Representation and control of the dynamics of stigmergic substances used by bio-inspired approaches is a challenge when applied to robotics. In order to overcome this challenge, this work proposes a model to coordinate swarms of robots…

Robotics · Computer Science 2022-03-01 Claudiney R. Tinoco , Gina M. B. Oliveira

Transport of tracer particles through mesh-like environments such as biological hydrogels and polymer matrices is ubiquitous in nature. These tracers could be passive, such as colloids or active (self-propelled), such as synthetic…

Soft Condensed Matter · Physics 2022-12-08 Praveen Kumar , Rajarshi Chakrabarti

Guided movement in response to slowly diffusing polymeric trails provides a unique mechanism for self-organization of some microorganisms. To elucidate how this signaling route leads to microcolony formation, we experimentally probe the…

Cell Behavior · Quantitative Biology 2016-10-26 Anatolij Gelimson , Kun Zhao , Calvin K. Lee , W. Till Kranz , Gerard C. L. Wong , Ramin Golestanian

The Physarum solver is an intuitive mechanism for solving optimisation problems based on the idea of an electrical network, whereby the conductivity is reinforced by the current. We show that the Physarum solver obtains the solution to the…

Optimization and Control · Mathematics 2011-01-28 Kentaro Ito , Anders Johansson , Toshiyuki Nakagaki , Atsushi Tero

Cells control the size and organization of biomolecular condensates formed by liquid-liquid phase separation (LLPS), but multiple mechanisms likely contribute to this control and remain to be fully elucidated. Here we propose a…

Biological Physics · Physics 2026-04-10 Le Qiao , Peter Gispert , Lukas S. Stelzl , Friederike Schmid

Mobility is a key factor in urban life and transport network plays a vital role in mobility. Worse transport network having less mobility is one of the key reasons to decline the living standard in any unplanned mega city. Transport…

Physics and Society · Physics 2023-02-01 Md. Ahsan Habib , M. A. H. Akhand
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