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Polydisperse fibre networks are the basis of many natural and man-made architectures, ranging from high-performance bio-based materials to components of living cells and tissues. The formation and persistence of such networks are given by…

Soft Condensed Matter · Physics 2019-03-28 Christophe Brouzet , Nitesh Mittal , Fredrik Lundell , Daniel Söderberg

The dynamics of a plasmoid chain is studied with three dimensional Particle-in-Cell simulations. The evolution of the system with and without a uniform guide field, whose strength is 1/3 the asymptotic magnetic field, is investigated. The…

Colonies of ants are systems of interacting living organisms in which interactions between individuals and their environment can produce a reliable performance of a complex tasks without the need for centralised control. Particularly…

Biological Physics · Physics 2015-08-28 Miriam Malíčková , Christian Yates , Katarína Boďová

Left-right axis specification establishes embryonic laterality through asymmetric signaling cascades originating at the cellular scale. We previously reported the presence of a directionality bias in confined pairs of endothelial (and…

Cell Behavior · Quantitative Biology 2026-03-31 Egun Im , Ghina Badih , Laetitia Kurzawa , Andreas Buttenschön , Calina Copos

Living creatures exhibit a remarkable diversity of locomotion mechanisms, evolving structures specialised for interacting with their environment. In the vast majority of cases, locomotor behaviours such as flying, crawling, and running, are…

Biological Physics · Physics 2020-07-28 Kirsty Y. Wan

Filamentous cyanobacteria can show fascinating examples of nonequilibrium self-organization, which however are not well-understood from a physical perspective. We investigate the motility and collective organization of colonies of these…

Soft Condensed Matter · Physics 2023-10-20 Mixon K. Faluweki , Jan Cammann , Marco G. Mazza , Lucas Goehring

Confined thin structures are ubiquitous in nature. Spatial and length constraints have led to a number of novel packing strategies at both the micro-scale, as when DNA packages inside a capsid, and the macro-scale, seen in plant root…

Soft Condensed Matter · Physics 2019-11-28 David J. Schunter, , Regina K. Czech , Douglas P. Holmes

The transport of deformable particles through porous media underlies a wealth of applications ranging from filtration to oil recovery to the transport and spreading of biological agents. Using direct numerical simulations, we analyze the…

Soft Condensed Matter · Physics 2020-06-09 Brato Chakrabarti , Charles Gaillard , David Saintillan

Today's deep learning architectures are primarily based on perceptron models, which do not capture the oscillatory dynamics characteristic of biological neurons. Although oscillatory systems have recently gained attention for their closer…

Machine Learning · Computer Science 2025-10-14 Zhongju Yuan , Geraint Wiggins , Dick Botteldooren

The nucleation and/or spreading of bubbles in water under tension (due to water evaporation) can be problematic for most plants along the ascending sap network from root to leaves, named xylem. Due to global warming, trees facing drought…

Fluid Dynamics · Physics 2025-11-17 François-Xavier Gauci , Ludovic Jami , Ludovic Keiser , Céline Cohen , Xavier Noblin

In this paper, we demonstrate a novel hybrid architecture for coordinating networked robots in sensing and information routing applications. The proposed INformation and Sensing driven PhysIcally REconfigurable robotic network (INSPIRE),…

Systems and Control · Computer Science 2016-11-18 Ryan K. Williams , Andrea Gasparri , Bhaskar Krishnamachari

Using molecular dynamics simulations, we study particle-transport in a system of interacting colloidal particles on a ring, where the system is driven by a time-dependent external potential, moving along the ring. We consider two driving…

Statistical Mechanics · Physics 2018-12-06 Shubhashis Rana , Sanchari Goswami , Sakuntala Chatterjee , Punyabrata Pradhan

Throughout developmental biology and ecology, transport can be driven by nonlocal interactions. Examples include cells that migrate based on contact with pseudopodia extended from other cells, and animals that move based on their vision of…

Pattern Formation and Solitons · Physics 2023-07-07 Thomas Jun Jewell , Andrew L. Krause , Philip K. Maini , Eamonn A. Gaffney

In swarm robotics, just as for an animal swarm in Nature, one of the aims is to reach and maintain a desired configuration. One of the possibilities for the team, to reach this aim, is to see what its neighbours are doing. This approach…

Computational Engineering, Finance, and Science · Computer Science 2020-04-08 R. dell'Erba

In this work we propose a novel device for controlling the flow of information using Weyl fermions. Based on a previous work of our group, we show that it is possible to fully control the flow of Weyl fermions on several different channels,…

A mechanism responsible for the directed transport and molecular separation in a symmetric channel is proposed. We found that under the action of spatial harmonic oscillations of the channel, the system exhibits a directed transport in…

Soft Condensed Matter · Physics 2007-05-23 D. Lichtenberg , A. E. Filippov , M. Urbakh

Gene regulatory networks constitute the first layer of the cellular computation for cell adaptation and surveillance. In these webs, a set of causal relations is built up from thousands of interactions between transcription factors and…

Molecular Networks · Quantitative Biology 2009-11-30 Carlos Rodriguez-Caso , Bernat Corominas-Murtra , Ricard V. Solé

Developmental trajectories are known to be canalized, or robust to both environmental and genetic perturbations. However, even when these trajectories are decanalized by an environmental perturbation outside of the range of conditions to…

Biological Physics · Physics 2025-09-25 Yuuki Matsushita , Archishman Raju

The so-called Filament Based Lamellipodium Model is a complex modeling framework for a very heterogeneous chemo-mechanical system of cell biology. It contains a model for Coulomb repulsion between filaments, whose effect on the stability of…

Dynamical Systems · Mathematics 2026-03-17 Gervy Marie Angeles , Jared Barber , Christian Schmeiser

Symmetry principles play an important role in geometry, and physics, allowing for the reduction of complicated systems to simpler, more comprehensible models that preserve the system's features of interest. Biological systems are often…

Cell Behavior · Quantitative Biology 2025-02-26 Luis A. Álvarez-García , Wolfram Liebermeister , Ian Leifer , Hernán A. Makse
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