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Given a rooted, binary phylogenetic network and a rooted, binary phylogenetic tree, can the tree be embedded into the network? This problem, called \textsc{Tree Containment}, arises when validating networks constructed by phylogenetic…

Populations and Evolution · Quantitative Biology 2024-02-14 Leo van Iersel , Mark Jones , Mathias Weller

A graph is called integral if all eigenvalues of its adjacency matrix consist entirely of integers. Recently, Csikvari proved the existence of integral trees of any even diameter. In the odd case, integral trees have been constructed with…

Combinatorics · Mathematics 2010-11-23 E. Ghorbani , A. Mohammadian , B. Tayfeh-Rezaie

In this paper, we study the multiplicity of the Laplacian eigenvalues of trees. It is known that for trees, integer Laplacian eigenvalues larger than $1$ are simple and also the multiplicity of Laplacian eigenvalue $1$ has been well studied…

Combinatorics · Mathematics 2019-10-25 S. Akbari , E. R. van Dam , M. H. Fakharan

When $k|n$, the tree $\mathrm{Comb}_{n,k}$ consists of a path containing $n/k$ vertices, each of whose vertices has a disjoint path length $k-1$ beginning at it. We show that, for any $k=k(n)$ and $\epsilon>0$, the binomial random graph…

Combinatorics · Mathematics 2014-05-27 Richard Montgomery

We consider the counting problem of the number of \textit{leaf-labeled increasing trees}, where internal nodes may have an arbitrary number of descendants. The set of all such trees is a discrete representation of the genealogies obtained…

Populations and Evolution · Quantitative Biology 2022-11-08 Johannes Wirtz

Weighted recursive trees are built by adding successively vertices with predetermined weights to a tree: each new vertex is attached to a parent chosen at random with probability proportional to its weight. In the case where the total…

Probability · Mathematics 2022-07-12 Michel Pain , Delphin Sénizergues

This paper investigates two involutions on binary trees. One is the mirror symmetry of binary trees which combined with the classical bijection $\varphi$ between binary trees and plane trees answers an open problem posed by Bai and Chen.…

Combinatorics · Mathematics 2023-09-13 Yang Li , Zhicong Lin , Tongyuan Zhao

To each generic complex polynomial $p(z)$ there is associated a labeled binary tree (here referred to as a "lemniscate tree") that encodes the topological type of the graph of $|p(z)|$. The branching structure of the lemniscate tree is…

Probability · Mathematics 2018-06-05 Michael Epstein , Boris Hanin , Erik Lundberg

Let $\mathcal{T}_n$ be the set of trees with $n$ vertices. Suppose that each tree in $\mathcal{T}_n$ is equally likely. We show that the number of different rooted trees of a tree equals $(\mu_r+o(1))n$ for almost every tree of…

Combinatorics · Mathematics 2013-05-21 Xueliang Li , Yiyang Li , Yongtang Shi

In the critical beta-splitting model of a random $n$-leaf rooted tree, clades are recursively (from the root) split into sub-clades, and a clade of $m$ leaves is split into sub-clades containing $i$ and $m-i$ leaves with probabilities…

Probability · Mathematics 2025-04-21 David J. Aldous , Svante Janson

An inversion sequence of length $n$ is an integer sequence $(a_1, \ldots, a_n)$ such that $0 \le a_i < i$ for all $i$. The study of pattern-avoiding inversion sequences was initiated in 2015 by Mansour and Shattuck and in 2016 by Corteel,…

Combinatorics · Mathematics 2025-12-29 Nathan Britt , Nicholas Beaton

We present here a new and universal approach for the study of random and/or trees, unifying in one framework many different models, including some novel ones not yet understood in the literature. An and/or tree is a Boolean expression…

Probability · Mathematics 2017-06-09 Nicolas Broutin , Cécile Mailler

This paper proves that two differently defined rooted binary trees are isomorphic. The first tree is one associated to a version of Farey sequences where the vertices correspond to the open intervals formed by two successive terms in the…

Combinatorics · Mathematics 2025-12-16 Makoto Nagata , Yoshinori Takei

In this paper, we study arbitrary subword-closed languages over the alphabet $\{0,1\}$ (binary subword-closed languages). For the set of words $L(n)$ of the length $n$ belonging to a binary subword-closed language $L$, we investigate the…

Formal Languages and Automata Theory · Computer Science 2023-03-22 Mikhail Moshkov

In this paper we investigate an extremal problem on binary phylogenetic trees. Given two such trees $T_1$ and $T_2$, both with leaf-set ${1,2,...,n}$, we are interested in the size of the largest subset $S \subseteq {1,2,...,n}$ of leaves…

Combinatorics · Mathematics 2013-02-21 Daniel M. Martin , Bhalchandra D. Thatte

Labeled infinite trees provide combinatorial interpretations for many integer sequences generated by nested recurrence relations. Typically, such sequences are monotone increasing. Several of these sequences also have straightforward…

Combinatorics · Mathematics 2022-11-07 Nathan Fox

An evolutionary tree is a rooted tree where each internal vertex has at least two children and where the leaves are labeled with distinct symbols representing species. Evolutionary trees are useful for modeling the evolutionary history of…

Computational Engineering, Finance, and Science · Computer Science 2007-05-23 Ming-Yang Kao

We study the detection error probability associated with a balanced binary relay tree, where the leaves of the tree correspond to $N$ identical and independent detectors. The root of the tree represents a fusion center that makes the…

Information Theory · Computer Science 2011-05-09 Zhenliang Zhang , Ali Pezeshki , William Moran , Stephen D. Howard , Edwin K. P. Chong

We study two related probabilistic models of permutations and trees biased by their number of descents. Here, a descent in a permutation $\sigma$ is a pair of consecutive elements $\sigma(i), \sigma(i+1)$ such that $\sigma(i) >…

Probability · Mathematics 2023-12-19 Paul Thévenin , Stephan Wagner

Let i.i.d. symmetric Bernoulli random variables be associated to the edges of a binary tree having n levels. To any leaf of the tree, we associate the sum of variables along the path connecting the leaf with the tree root. Let M_n denote…

Probability · Mathematics 2015-02-24 M. A. Lifshits