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We analyze adaptive mesh-refining algorithms for conforming finite element discretizations of certain non-linear second-order partial differential equations. We allow continuous polynomials of arbitrary, but fixed polynomial order. The…

Numerical Analysis · Mathematics 2014-03-14 Michael Feischl , Thomas Führer , Dirk Praetorius

We consider the Schur-Horn problem for normal operators in von Neumann algebras, which is the problem of characterizing the possible diagonal values of a given normal operator based on its spectral data. For normal matrices, this problem is…

Operator Algebras · Mathematics 2015-10-28 Matthew Kennedy , Paul Skoufranis

The conformations of interacting linear polymers on a dynamical planar random lattice are studied using a random two-matrix model. An exact expression for the partition function of self-avoiding chains subject to attractive contact…

Condensed Matter · Physics 2008-02-03 Simon Dalley

In this paper we continue studying of matrix $n\times n$ linear differential intertwining operators. The problems of minimization and of reducibility of matrix intertwining operators are considered and criterions of weak minimizability and…

Mathematical Physics · Physics 2019-01-01 Andrey V. Sokolov

Logistic equations play a pivotal role in the study of any non linear evolution process exhibiting growth and saturation. The interest for the phenomenology, they rule, goes well beyond physical processes and cover many aspects of ecology,…

Classical Analysis and ODEs · Mathematics 2023-08-14 G. Dattoli , R. Garra

Active polymers play a central role in many biological systems, from bacterial flagella to cellular cytoskeletons. Minimal models of semiflexible active filaments have been used to study a variety of interesting phenomena in active systems,…

Soft Condensed Matter · Physics 2020-02-19 Matthew S. E. Peterson , Michael F. Hagan , Aparna Baskaran

Remarkable parallelism between the theory of integrable systems of first-order quasilinear PDE and some old results in projective and affine differential geometry of conjugate nets, Laplace equations, their Bianchi-Baecklund transformations…

High Energy Physics - Theory · Physics 2008-02-03 S. P. Tsarev

We present a framework which enables the analysis of dynamic inverse problems for wave phenomena that are modeled through second-order hyperbolic PDEs. This includes well-posedness and regularity results for the forward operator in an…

Analysis of PDEs · Mathematics 2020-02-19 Thies Gerken

The inheritance of characteristics induced by the environment has often been opposed to the theory of evolution by natural selection. Yet, while evolution by natural selection requires new heritable traits to be produced and transmitted, it…

Populations and Evolution · Quantitative Biology 2015-06-18 Olivier Rivoire , Stanislas Leibler

Polymer models are a widely used tool to study the prebiotic formation of metabolism at the origins of life. Counts of the number of reactions in these models are often crucial in probabilistic arguments concerning the emergence of…

Molecular Networks · Quantitative Biology 2021-04-14 Oliver Weller-Davies , Mike Steel , Jotun Hein

We study phenomenological scaling theories of the polymer dynamics in random media, employing the existing scaling theories of polymer chains and the percolation statistics. We investigate both the Rouse and the Zimm model for Brownian…

Soft Condensed Matter · Physics 2015-06-24 Bikas K. Chakrabarti , Amit K. Chattopadhyay , Amit Dutta

Identifiability of phylogenetic models is a necessary condition to ensure that the model parameters can be uniquely determined from data. Mixture models are phylogenetic models where the probability distributions in the model are convex…

Populations and Evolution · Quantitative Biology 2025-08-11 Bryson Kagy , Seth Sullivant

Multiparameter persistent homology has been largely neglected as an input to machine learning algorithms. We consider the use of lattice-based convolutional neural network layers as a tool for the analysis of features arising from…

Algebraic Topology · Mathematics 2022-09-01 Hans Riess , Jakob Hansen , Robert Ghrist

We consider evolution equations generated by quadratic operators admitting a decomposition in creation-annihilation operators without usual ellipticity-type hypotheses; this class includes hypocoercive model operators. We identify the…

Analysis of PDEs · Mathematics 2014-09-05 Alexandru Aleman , Joe Viola

We study a birth and death model for the adapatation of a sexual population to an environment. The population is structured by a phenotypical trait, and, possibly, an age variable. Recombination is modeled by Fisher's infinitesimal…

Populations and Evolution · Quantitative Biology 2017-03-28 Thibault Bourgeron , Vincent Calvez , Jimmy Garnier , Thomas Lepoutre

We review and present new studies on the relation between the partition functions of integrable lattice models and symmetric polynomials, and its combinatorial representation theory based on the correspondence, including our work. In…

Mathematical Physics · Physics 2015-12-29 Kohei Motegi , Kazumitsu Sakai , Satoshi Watanabe

We consider the exactly solvable quantum mechanical systems whose eigenfunctions are described by the multi-indexed orthogonal polynomials of Laguerre, Jacobi, Wilson and Askey-Wilson types. Corresponding to the recurrence relations with…

Mathematical Physics · Physics 2016-11-10 Satoru Odake

Recently there have been several attempts to provide a whole set of generators of the ideal of the algebraic variety associated to a phylogenetic tree evolving under an algebraic model. These algebraic varieties have been proven to be…

Algebraic Geometry · Mathematics 2009-12-11 Marta Casanellas , Jesus Fernandez-Sanchez

Several classes of systems of evolution equations with one or two vector unknowns are considered. We investigate also systems with one vector and one scalar unknown. For these classes all equations having the simplest higher symmetry are…

Exactly Solvable and Integrable Systems · Physics 2009-11-11 Vladimir V Sokolov , Thomas Wolf

The phenomenon of gene conservation is an interesting evolutionary problem related to speciation and adaptation. Conserved genes are acted upon in evolution in a way that preserves their function despite other structural and functional…

Genomics · Quantitative Biology 2008-07-23 Bradly J. Alicea , Marcela A. Carvallo-Pinto , Jorge L. M. Rodrigues
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