Related papers: Intrinsic Mean Square Displacements in Proteins
The calculation of thermodynamic properties of biochemical systems typically requires the use of resource-intensive molecular simulation methods. One example thereof is the thermodynamic profiling of hydration sites, i.e. high-probability…
We study energy dissipation and heating by supersonic MHD turbulence in molecular clouds using Athena, a new higher-order Godunov code. We analyze the dependence of the saturation amplitude, energy dissipation characteristics, power…
Magnetohydrodynamic (MHD) phenomena play a pivotal role in the design and operation of nuclear fusion systems, where electrically conducting fluids (such as liquid metals or molten salts employed in reactor blankets) interact with magnetic…
We present the results of our detailed pseudospectral direct numerical simulation (DNS) studies, with up to $1024^3$ collocation points, of incompressible, magnetohydrodynamic (MHD) turbulence in three dimensions, without a mean magnetic…
The aim of the present work is to derive rigorous estimates for turbulent MHD flow quantities such as the size and anisotropy of the dissipative scales, as well as the transition between 2D and 3D state. To this end, we calculate an upper…
We investigate non-contraction of large perturbations around intermediate entropic shock waves and contact discontinuities for the three-dimensional planar compressible isentropic magnetohydrodynamics (MHD). To do that, we take advantage of…
The mass shift, width broadening, and spectral density for the $\rho$ and $\omega$ mesons in a heat bath of nucleons and pions are calculated using a general formula which relates the self-energy to the real and imaginary parts of the…
Non-invasive measurement of absolute temperature is important for proper characterization of various pathologies and for evaluation of thermal dose during interventional procedures. The proton magnetic resonance (MR) frequency shift method…
Mechanical testing of micropillars is a field that involves new physics, as the behaviour of materials is non-deterministic at this scale. To better understand their deformation mechanisms we applied 3-dimensional high angular resolution…
We show that deep inelastic neutron scattering from hydrogen(or other light nuclei) can be used to measure a spectrum of anharmonic contributions to the target atom momentum distribution with high and known accuracy . The method is applied…
Multidimensional scaling (MDS) is a family of methods that embed a given set of points into a simple, usually flat, domain. The points are assumed to be sampled from some metric space, and the mapping attempts to preserve the distances…
Induction time, a measure of how long one will wait for nucleation to occur, is an important parameter in quantifying nucleation kinetics and its underlying mechanisms. Due to the stochastic nature of nucleation, efficient methods for…
The vibrational motion of molecules in dissipative environments, such as solvation and protein molecules, is composed of contributions from both intermolecular and intramolecular modes. The existence of these collective modes introduces…
We present a new magnetohydrodynamic (MHD) code for the simulation of wave propagation in the solar atmosphere, under the effects of electrical resistivity, but not dominant, and heat transference in a uniform 3D grid. The code is based on…
Two-dimensional infrared spectroscopy experiments have presented new results regarding the dynamics of the hydrated excess proton (aka <q>hydronium</q> cation solvated in water). It has been suggested by these experiments that the hydrated…
The local intrinsic dimension (LID) of data is a fundamental quantity in signal processing and learning theory, but quantifying the LID of high-dimensional, complex data has been a historically challenging task. Recent works have discovered…
We investigate the Drude weight and the related Mazur-Suzuki (MS) bound in a broad variety of strongly coupled field theories with a gravity dual at finite temperature and chemical potential. We revisit the derivation of the recently…
The function of membrane-embedded proteins such as ion channels depends crucially on their conformation. We demonstrate how conformational changes in asymmetric membrane proteins may be inferred from measurements of their diffusion. Such…
We report STM-induced desorption of H from Si(100)-H(2$\times1$) at negative sample bias. The desorption rate exhibits a power-law dependence on current and a maximum desorption rate at -7 V. The desorption is explained by vibrational…
Thermal waves are caused by pure diffusion: their amplitude is decreased by more than a factor of 500 within a propagation distance of one wavelength. The diffusion equation, which describes the temperature as a function of space and time,…