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In this paper we analyse some questions concerning trees on $\kappa$, both for the countable and the uncountable case, and the connections with Cohen reals. In particular, we provide a proof for one of the implications left open in…

Logic · Mathematics 2020-04-24 Giorgio Laguzzi , Brendan Stuber-Rousselle

We consider a probability distribution on the set of Boolean functions in n variables which is induced by random Boolean expressions. Such an expression is a random rooted plane tree where the internal vertices are labelled with connectives…

Combinatorics · Mathematics 2015-09-28 Antoine Genitrini , Bernhard Gittenberger , Veronika Kraus , Cécile Mailler

Poly-trees are singly connected causal networks in which variables may arise from multiple causes. This paper develops a method of recovering ply-trees from empirically measured probability distributions of pairs of variables. The method…

Artificial Intelligence · Computer Science 2013-04-11 George Rebane , Judea Pearl

The matrices of spanning rooted forests are studied as a tool for analysing the structure of networks and measuring their properties. The problems of revealing the basic bicomponents, measuring vertex proximity, and ranking from preference…

Combinatorics · Mathematics 2013-05-29 Pavel Chebotarev , Rafig Agaev

While the notion of arboricity of a graph is well-known in graph theory, very few results are dedicated to the minimal number of trees covering the edges of a graph, called the tree number of a graph.

Discrete Mathematics · Computer Science 2020-08-03 Natalia Vanetik

In this short note, we find the number of forests of chord diagrams with a given number of trees and a given number of chords.

Combinatorics · Mathematics 2015-01-08 Huseyin Acan

In order to conduct a statistical analysis on a given set of phylogenetic gene trees, we often use a distance measure between two trees. In a statistical distance-based method to analyze discordance between gene trees, it is a key to decide…

Populations and Evolution · Quantitative Biology 2016-02-05 Jing Xi , Jin Xie , Ruriko Yoshida

We investigate the spectral properties of rooted trees with the intention of improving the currently existing results that deal with this matter. The concept of an assigned rational function is recursively defined for each vertex of a…

Combinatorics · Mathematics 2024-05-24 Ivan Damnjanović

We determine upper and lower bounds for the number of maximum matchings (i.e., matchings of maximum cardinality) $m(T)$ of a tree $T$ of given order. While the trees that attain the lower bound are easily characterised, the trees with…

Combinatorics · Mathematics 2013-04-09 Clemens Heuberger , Stephan Wagner

Measures of tree balance play an important role in different research areas such as mathematical phylogenetics or theoretical computer science. The balance of a tree is usually quantified in a single number, called a balance or imbalance…

Combinatorics · Mathematics 2024-06-28 Bryan Currie , Kristina Wicke

A string-like compact data structure for unlabelled rooted trees is given using 2n bits.

Data Structures and Algorithms · Computer Science 2015-03-20 Julius D'souza

We analyze several florae (collections of plant species populating specific areas) in different geographic and climatic regions. For every list of species we produce a taxonomic classification tree and we consider its statistical…

Populations and Evolution · Quantitative Biology 2008-06-13 C. Caretta Cartozo , D. Garlaschelli , C. Ricotta , M. Barthelemy , G. Caldarelli

A transversal in a rooted tree is any set of nodes that meets every path from the root to a leaf. We let c(T,k) denote the number of transversals of size k in a rooted tree T. We define a partial order on the set of all rooted trees with n…

Combinatorics · Mathematics 2013-08-20 Victor Campos , Vasek Chvatal , Luc Devroye , Perouz Taslakian

The classes of tree permutations and forest permutations were defined by Acan and Hitczenko (2016). We study random permutations of a given length from these classes, and in particular the number of occurrences of a fixed pattern in one of…

Combinatorics · Mathematics 2022-03-10 Svante Janson

We calculate the exact number of contours of size $n$ containing a fixed vertex in $d$-ary trees and provide sharp estimates for this number for more general trees. We also obtain a characterization of the locally finite trees with…

Combinatorics · Mathematics 2016-12-21 Noga Alon , Rodrigo Bissacot , Eric Ossami Endo

Let $T$ be a weighted tree. The weight of a subtree $T_1$ of $T$ is defined as the product of weights of vertices and edges of $T_1$. We obtain a linear-time algorithm to count the sum of weights of subtrees of $T$. As applications, we…

Combinatorics · Mathematics 2007-05-23 Weigen Yan , Yeong-Nan Yeh

Let $\Gamma$ be a rooted tree and let $t$ be a positive integer. We study algebraic invariants and properties of the path ideal generated by monomial corresponding to paths of length $(t-1)$ in $\Gamma$. In particular, we give a recursive…

Commutative Algebra · Mathematics 2011-06-07 Rachelle R. Bouchat , Huy Tai Ha , Augustine O'Keefe

When considering the number of subtrees of trees, the extremal structures which maximize this number among binary trees and trees with a given maximum degree lead to some interesting facts that correlate to other graphical indices in…

Combinatorics · Mathematics 2012-10-11 Xiu-Mei Zhang , Xiao-Dong Zhang , Daniel Gray , Hua Wang

Rooted binary perfect phylogenies provide a generalization of rooted binary unlabeled trees in which each leaf is assigned a positive integer value that corresponds in a biological setting to the count of the number of indistinguishable…

Populations and Evolution · Quantitative Biology 2024-10-22 Chloe E. Shiff , Noah A. Rosenberg

Mast fruiting represents a synchronous population behaviour which can spread on large landscape areas. This reproductive pattern is generally perceived as a synchronous periodic production of large seed crops and has a significant practical…

Quantitative Methods · Quantitative Biology 2016-02-12 Ciprian Palaghianu , Marian Dragoi