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Recently, it was shown that the amoeba-like cell {\it Physarum polycephalum} when exposed to a pattern of periodic environmental changes learns and adapts its behavior in anticipation of the next stimulus to come. Here we show that such…

Cell Behavior · Quantitative Biology 2009-11-21 Yuriy V. Pershin , Steven La Fontaine , Massimiliano Di Ventra

Inspired by the growth dynamics of the protist \textit{Physarum polycephalum}, we employ a formalism that describes adaptive, incompressible Hagen-Poiseuille flows on channel networks to identify graphs connecting different nodes within…

Physics and Society · Physics 2025-07-18 Rodrigo Almeida , Ana Filipa Valente , Rui Dilão

We prove that computing a shortest monotone path to the optimum of a linear program over a simple polytope is NP-hard, thus resolving a 2022 open question of De Loera, Kafer, and Sanit\`a. As a consequence, finding a shortest sequence of…

Data Structures and Algorithms · Computer Science 2026-04-09 Alexander E. Black , Raphael Steiner

Swarm Intelligence is a metaheuristic optimization approach that has become very predominant over the last few decades. These algorithms are inspired by animals' physical behaviors and their evolutionary perceptions. The simplicity of these…

Neural and Evolutionary Computing · Computer Science 2019-04-23 Ahmed S. Shamsaldin , Tarik A. Rashid , Rawan A. Al-Rashid Agha , Nawzad K. Al-Salihi , Mokhtar Mohammadi

We numerically investigate the performance of the short path optimization algorithm on a toy problem, with the potential chosen to depend only on the total Hamming weight to allow simulation of larger systems. We consider classes of…

Quantum Physics · Physics 2019-05-22 M. B. Hastings

Particle swarm optimization (PSO) is a search algorithm based on stochastic and population-based adaptive optimization. In this paper, a pathfinding strategy is proposed to improve the efficiency of path planning for a broad range of…

Neural and Evolutionary Computing · Computer Science 2022-06-24 David , Budi Adiperdana

Computing distances and finding shortest paths in massive real-world networks is a fundamental algorithmic task in network analysis. There are two main approaches to solving this task. On one hand are traversal-based algorithms like…

Data Structures and Algorithms · Computer Science 2024-06-14 Sabyasachi Basu , Nadia Kōshima , Talya Eden , Omri Ben-Eliezer , C. Seshadhri

Colonies of the arboreal turtle ant create networks of trails that link nests and food sources on the graph formed by branches and vines in the canopy of the tropical forest. Ants put down a volatile pheromone on edges as they traverse…

Data Structures and Algorithms · Computer Science 2023-07-04 Shivam Garg , Kirankumar Shiragur , Deborah M. Gordon , Moses Charikar

Given a polygon representing a transportation network together with a point p in its interior, we aim to extend the network by inserting a line segment, called a feed-link, which connects p to the boundary of the polygon. Once a feed link…

Computational Geometry · Computer Science 2013-07-30 Marko Savić , Miloš Stojaković

PyLlama is a handy Python toolkit to compute the electromagnetic reflection and transmission properties of arbitrary multilayered linear media, including the case of anisotropy. Relying on a $4 \times 4$-matrix formalism, PyLlama implements…

Optics · Physics 2021-12-24 Mélanie M. Bay , Silvia Vignolini , Kevin Vynck

Traditional methods present a very restrictive range of applications, mainly limited by the features of the function to be optimized and of the constraint functions. In contrast, evolutionary algorithms present almost no restriction to the…

Neural and Evolutionary Computing · Computer Science 2021-01-26 Mauro S. Innocente , Johann Sienz

The shortest path problem is among the most fundamental combinatorial optimization problems to answer reachability queries. It is hard to deter-mine which vertices or edges are visited during shortest path traversals. In this paper, we…

Social and Information Networks · Computer Science 2014-12-30 Waqas Nawaz , Kifayat Ullah Khan , Young-Koo Lee

Complex systems are usually modelled through a combination of structural and behavioural models, where separate behavioural models make it easier to design and understand partial behaviour. When partial models are combined, we need to…

Software Engineering · Computer Science 2017-07-19 Juliana Bowles , Marco B. Caminati

We revisit the minimum-link path problem: Given a polyhedral domain and two points in it, connect the points by a polygonal path with minimum number of edges. We consider settings where the vertices and/or the edges of the path are…

Computational Geometry · Computer Science 2019-03-12 Irina Kostitsyna , Maarten Löffler , Valentin Polishchuk , Frank Staals

Particle swarm optimization (PSO) is a widely used nature-inspired meta-heuristic for solving continuous optimization problems. However, when running the PSO algorithm, one encounters the phenomenon of so-called stagnation, that means in…

Neural and Evolutionary Computing · Computer Science 2013-08-09 Manuel Schmitt , Rolf Wanka

The "cosmic web", the filamentary large-scale structure in a cold dark matter Universe, is readily apparent via galaxy tracers in spectroscopic surveys. However, the underlying dark matter structure is as of yet unobservable and mapping the…

Cosmology and Nongalactic Astrophysics · Physics 2023-01-10 Matthew C. Wilde , Oskar Elek , Joseph N. Burchett , Daisuke Nagai , J. Xavier Prochaska , Jessica Werk , Sarah Tuttle , Angus G. Forbes

We study the problem of maximizing a monotone submodular function with viability constraints. This problem originates from computational biology, where we are given a phylogenetic tree over a set of species and a directed graph, the…

Data Structures and Algorithms · Computer Science 2016-11-18 Wolfgang Dvořák , Monika Henzinger , David P. Williamson

Firefly algorithm is a swarm based metaheuristic algorithm inspired by the flashing behavior of fireflies. It is an effective and an easy to implement algorithm. It has been tested on different problems from different disciplines and found…

Neural and Evolutionary Computing · Computer Science 2016-02-26 Surafel Luleseged Tilahun , Jean Medard T Ngnotchouye

Lateral Inhibition (LI) phenomena occur in a wide range of sensory modalities and are most famously described in the human visual system. In LI the activity of a stimulated neuron is itself excited and suppresses the activity of its local…

Emerging Technologies · Computer Science 2015-11-25 Jeff Dale Jones

Swarm intelligence and bio-inspired algorithms form a hot topic in the developments of new algorithms inspired by nature. These nature-inspired metaheuristic algorithms can be based on swarm intelligence, biological systems, physical and…

Neural and Evolutionary Computing · Computer Science 2013-07-17 Iztok Fister , Xin-She Yang , Iztok Fister , Janez Brest , Dušan Fister