Related papers: On the graph labellings arising from phylogenetics
The phylogenetic semigroup on a graph generalizes the Jukes-Cantor binary model on a tree. Minimal generating sets of phylogenetic semigroups have been described for trivalent trees by Buczy\'nska and Wi\'sniewski, and for trivalent graphs…
In this paper, we introduce new combinatorial invariants of any finite simple graph, which arise in toric topology. We compute the $i$-th (rational) Betti number and Euler characteristic of the real toric variety associated to a graph…
We study the homology of an explicit finite-index subgroup of the automorphism group of a partially commutative group, in the case when its defining graph is a tree. More concretely, we give a lower bound on the first Betti number of this…
In a recent work, Keusch proved the so-called 1-2-3 Conjecture, raised by Karo\'nski, {\L}uczak, and Thomason in 2004: for every connected graph different from $K_2$, we can assign labels~$1,2,3$ to the edges so that no two adjacent…
We compute the graded Betti numbers for the toric ideal of a family of graphs constructed by adjoining a cycle to a complete bipartite graph. The key observation is that this family admits an initial ideal which has linear quotients. As a…
We give combinatorial proofs of some enumeration formulas involving labelled threshold, quasi-threshold, loop-threshold and quasi-loop-threshold graphs. In each case we count by number of vertices and number of components. For threshold…
We improve the previously best known lower and upper bounds on the number n_g of numerical semigroups of genus g. Starting from a known recursive description of the tree T of numerical semigroups, we analyze some of its properties and use…
In a paper by Lin an interesting family of semipermutations comes out to index the elements of a cohomology basis of a Hessenberg type variety. The corresponding Betti numbers are a generalization of Eulerian numbers. We show three…
We define phylogenetic projective toric model of a trivalent graph as a generalization of a binary symmetric model of a trivalent phylogenetic tree. Generators of the pro- jective coordinate ring of the models of graphs with one cycle are…
The study of very large graphs is a prominent theme in modern-day mathematics. In this paper we develop a rigorous foundation for studying the space of finite labelled graphs and their limits. These limiting objects are naturally countable…
Associated to any hypergraph is a toric ideal encoding the algebraic relations among its edges. We study these ideals and the combinatorics of their minimal generators, and derive general degree bounds for both uniform and non-uniform…
Given a graph $G$, a \textit{$k$-total difference labeling} of the graph is a total labeling $f$ from the set of edges and vertices to the set $\{1, 2, \cdots k\}$ satisfying that for any edge $\{u,v\}$, $f(\{u,v\})=|f(u)-f(v)|$. If $G$ is…
We give bounds on the L(2,1)-labeling number of a simple graph in terms of its order and its maximum degree. We also describe an infinite class of graphs of which the elements have the highest L(2,1)-labeling numbers in terms of their…
Working in any model theoretic structure, we single out a class of definable bipartite graphs that admit definable, close to perfect matchings. We use this result to prove a strengthening of Tarski's theorem for the definable setting.
Graph neural networks (GNNs) have achieved superior performance on node classification tasks in the last few years. Commonly, this is framed in a transductive semi-supervised learning setup wherein the entire graph, including the target…
A proper labelling of a graph $G$ is a pair $({\pi},c_{\pi})$ in which ${\pi}$ is an assignment of numeric labels to some elements of $G$, and $c_{\pi}$ is a colouring induced by ${\pi}$ through some mathematical function over the set of…
We obtain first order linear partial differential equations which are satisfied by exponential generating functions of two variables for the number of connected bipartite graphs with given Betti number. By solving these equations…
The 1-2-3 Conjecture asks whether almost all graphs can be (edge-)labelled with $1,2,3$ so that no two adjacent vertices are incident to the same sum of labels. In the last decades, several aspects of this problem have been studied in…
Associated to any graph is a toric ideal whose generators record relations among the cuts of the graph. We study these ideals and the geometry of the corresponding toric varieties. Our theorems and conjectures relate the combinatorial…
Given a graph $G$ with $n$ vertices and a bijective labeling of the vertices using the integers $1,2,\ldots, n$, we say $G$ has a peak at vertex $v$ if the degree of $v$ is greater than or equal to 2, and if the label on $v$ is larger than…