Related papers: On the graph labellings arising from phylogenetics
We focus on counting the number of labeled graphs on $n$ vertices and treewidth at most $k$ (or equivalently, the number of labeled partial $k$-trees), which we denote by $T_{n,k}$. So far, only the particular cases $T_{n,1}$ and $T_{n,2}$…
Making use of a majorization technique for a suitable class of graphs, we derive upper and lower bounds for some topological indices depending on the degree sequence over all vertices, namely the first general Zagreb index and the first…
We consider a family of problems that are concerned about making predictions for the majority of unlabeled, graph-structured data samples based on a small proportion of labeled samples. Relational information among the data samples, often…
A labelling of a graph is an assignment of labels to its vertex or edge sets (or both), subject to certain conditions, a well established concept. A labelling of a graph G of order n is termed a numbering when the set of integers {1,...,n}…
Let $G$ be a simple graph of order $n\geq 2$ and let $k\in \{1,\ldots ,n-1\}$. The $k$-token graph $F_k(G)$ of $G$ is the graph whose vertices are the $k$-subsets of $V(G)$, where two vertices are adjacent in $F_k(G)$ whenever their…
We give an explicit set of generators for the semigroup of the Gr\"obner degeneration of a toric ideal. This set of generators is used to study algebraic properties of the semigroup it generates: approximation of semigroups,…
We derive a number of upper and lower bounds for the first nontrivial eigenvalue of a finite quantum graph in terms of the edge connectivity of the graph, i.e., the minimal number of edges which need to be removed to make the graph…
Path homology is a topological invariant for directed graphs, which is sensitive to their asymmetry and can discern between digraphs which are indistinguishable to the directed flag complex. In Erd\"os-R\'enyi directed random graphs, the…
In this paper, we study the $L(2, 1)$-Labeling of the Mycielski and the iterated Mycielski of graphs in general. For a graph $G$ and all $t\geq 1$, we give sharp bounds for $\lambda(M^t(G))$ the $L(2, 1)$-labeling number of the $t$-th…
The inducibility of a graph $H$ measures the maximum number of induced copies of $H$ a large graph $G$ can have. Generalizing this notion, we study how many induced subgraphs of fixed order $k$ and size $\ell$ a large graph $G$ on $n$…
Phylogenetic networks are becoming increasingly popular in phylogenetics since they have the ability to describe a wider range of evolutionary events than their tree counterparts. In this paper, we study Markov models on phylogenetic…
With the wide-spread availability of complex relational data, semi-supervised node classification in graphs has become a central machine learning problem. Graph neural networks are a recent class of easy-to-train and accurate methods for…
We use a version of the Trotter-Kato approximation theorem for strongly continuous semigroups in order to study flows on growing networks. For that reason we use the abstract notion of direct limits in the sense of category theory.
We initiate the study of local topology of random graphs. The high level goal is to characterize local "motifs" in graphs. In this paper, we consider what we call the layer-$r$ subgraphs for an input graph $G = (V,E)$: Specifically, the…
We investigate the impact of a high-degree vertex in Tur\'{a}n problems for degenerate hypergraphs (including graphs). We say an $r$-graph $F$ is bounded if there exist constants $\alpha, \beta>0$ such that for large $n$, every $n$-vertex…
We study the statistics of edges and vertices in the vicinity of a reference vertex (origin) within random planar quadrangulations and Eulerian triangulations. Exact generating functions are obtained for theses graphs with fixed numbers of…
This note describes a new approach to classifying graphs that leverages graph generative models (GGM). Assuming a GGM that defines a joint probability distribution over graphs and their class labels, I derive classification formulas for the…
Let G be a numerical semigroup. In this paper, we prove an upper bound for the Betti numbers of the semigroup ring of G which depends only on the width of G, that is, the difference between the largest and the smallest generator of G. In…
In this paper, we introduce a class of graphs which we call average hereditary graphs. Many graphs that occur in the usual graph theory applications belong to this class of graphs. Many popular types of graphs fall under this class, such as…
Generalized Baumslag-Solitar groups (GBS groups) are groups that act on trees with infinite cyclic edge and vertex stabilizers. Such an action is described by a labeled graph (essentially, the quotient graph of groups). This paper addresses…