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Biclustering is a two way clustering approach involving simultaneous clustering along two dimensions of the data matrix. Finding biclusters of web objects (i.e. web users and web pages) is an emerging topic in the context of web usage…

Neural and Evolutionary Computing · Computer Science 2011-06-14 R. Rathipriya , Dr. K. Thangavel , J. Bagyamani

The citation impact of Environment and Planning B can be visualized using its citation relations with journals in its environment as the links of a network. The size of the nodes is varied in correspondence to the relative citation impact…

Digital Libraries · Computer Science 2009-11-17 Loet Leydesdorff

Based on an exponentially increasing number of academic articles, discovering and citing comprehensive and appropriate resources has become a non-trivial task. Conventional citation recommender methods suffer from severe information loss.…

Information Retrieval · Computer Science 2020-12-04 Yang Zhang , Qiang Ma

This article describes a procedure to generate a snapshot of the structure of a specific scientific community and their outputs based on the information available in Google Scholar Citations (GSC). We call this method MADAP (Multifaceted…

Digital Libraries · Computer Science 2018-05-01 Alberto Martín-Martín , Enrique Orduna-Malea , Emilio Delgado López-Cózar

One compelling use of citation networks is to characterize papers by their relationships to the surrounding literature. We propose a method to characterize papers by embedding them into two distinct "co-factor" spaces: one describing how…

Methodology · Statistics 2025-10-07 Alex Hayes , Karl Rohe

A citation is a well-established mechanism for connecting scientific artifacts. Citation networks are used by citation analysis for a variety of reasons, prominently to give credit to scientists' work. However, because of current citation…

Information Retrieval · Computer Science 2020-01-17 Tong Zeng , Longfeng Wu , Sarah Bratt , Daniel E. Acuna

In this paper, we present a survey of the use of graph theoretical techniques in Biology. In particular, we discuss recent work on identifying and modelling the structure of bio-molecular networks, as well as the application of centrality…

Molecular Networks · Quantitative Biology 2007-05-23 Oliver Mason , Mark Verwoerd

We use an information-theoretic measure of linguistic similarity to investigate the organization and evolution of scientific fields. An analysis of almost 20M papers from the past three decades reveals that the linguistic similarity is…

Digital Libraries · Computer Science 2018-01-30 Laercio Dias , Martin Gerlach , Joachim Scharloth , Eduardo G. Altmann

We study the statistics of ecosystems with a variable number of co-evolving species. The species interact in two ways: by prey-predator relationships and by direct competition with similar kinds. The interaction coefficients change slowly…

Adaptation and Self-Organizing Systems · Physics 2015-06-26 Michael Lassig , Ugo Bastolla , Susanna C. Manrubia , Angelo Valleriani

To a good extent, words can be understood as corresponding to patterns or categories that appeared in order to represent concepts and structures that are particularly important or useful in a given time and space. Words are characterized by…

Computation and Language · Computer Science 2021-07-21 Henrique Ferraz de Arruda , Luciano da Fontoura Costa

The representation of science as a citation-density landscape and the study of scaling rules with the field-specific citation-density as a main topological property was previously analysed at the level of research groups. Here the focus is…

Physics and Society · Physics 2008-03-10 Rodrigo Costas , Maria Bordons , Thed N. van Leeuwen , Anthony F. J. van Raan

A procedure to characterize chaotic dynamical systems with concepts of complex networks is pursued, in which a dynamical system is mapped onto a network. The nodes represent the regions of space visited by the system, while edges represent…

Statistical Mechanics · Physics 2011-12-20 Ernesto P. Borges , Daniel O. Cajueiro , Roberto F. S. Andrade

Despite the common misconception of nearly static organisms, plants do interact continuously with the environment and with each other. It is fair to assume that during their evolution they developed particular features to overcome problems…

Populations and Evolution · Quantitative Biology 2016-02-19 Gianna Vivaldo , Elisa Masi , Camilla Pandolfi , Stefano Mancuso , Guido Caldarelli

We inhabit a world that is not only small but supports efficient decentralized search - an individual using local information can establish a line of communication with another completely unknown individual. Here we augment a hierarchical…

Social and Information Networks · Computer Science 2016-02-01 Soumya Banerjee

Author co-citation studies employ factor analysis to reduce high-dimensional co-citation matrices to low-dimensional and possibly interpretable factors, but these studies do not use any information from the text bodies of publications. We…

Digital Libraries · Computer Science 2013-05-08 Arnim Bleier , Andreas Strotmann

Objective. The purpose of this work is to analyse the knowledge structure and trends in scientific research in the Online Information Reviews journal by bibliometric analysis of key words and social network analysis of co-words. Methods.…

Biological network alignment (NA) aims to find a node mapping between species' molecular networks that uncovers similar network regions, thus allowing for transfer of functional knowledge between the aligned nodes. However, current NA…

Molecular Networks · Quantitative Biology 2020-09-09 Shawn Gu , Tijana Milenkovic

The automatic assignment of species information to the corresponding genes in a research article is a critically important step in the gene normalization task, whereby a gene mention is normalized and linked to a database record or…

Computation and Language · Computer Science 2022-10-17 Ling Luo , Chih-Hsuan Wei , Po-Ting Lai , Qingyu Chen , Rezarta Islamaj Doğan , Zhiyong Lu

The task of expert finding has been getting increasing attention in information retrieval literature. However, the current state-of-the-art is still lacking in principled approaches for combining different sources of evidence in an optimal…

Information Retrieval · Computer Science 2013-02-05 Catarina Moreira , Pável Calado , Bruno Martins

Many innovations are inspired by past ideas in a non-trivial way. Tracing these origins and identifying scientific branches is crucial for research inspirations. In this paper, we use citation relations to identify the descendant chart,…

Physics and Society · Physics 2015-05-30 S. Gualdi , C. H. Yeung , Y. -C. Zhang