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Diffusion rates through a membrane can be asymmetric, if the diffusing particles are spatially extended and the pores in the membrane have asymmetric structure. This phenomenon is demonstrated here via a deterministic simulation of a…

Statistical Mechanics · Physics 2007-05-23 Norman Packard , Rob Shaw

The evolution of an inhomogeneous universe composed entirely of matter is followed from an early, nearly uniform state until the time when the inhomogeneities have begun to grow large. The particular distribution of matter studied in this…

Cosmology and Nongalactic Astrophysics · Physics 2010-11-10 Hael Collins

The problem of the diffusion evolution of a pore filled with molecular hydrogen in a spherical granule in a hydrogen medium is solved. The initial position of the pore is displaced relative to the center of the granule. A nonlinear system…

Mesoscale and Nanoscale Physics · Physics 2022-03-31 M. I. Kopp , P. N. Ostapchuk , V. V. Yanovsky

Consider a chaotic dynamical system generating Brownian motion-like diffusion. Consider a second, non-chaotic system in which all particles localize. Let a particle experience a random combination of both systems by sampling between them in…

Chaotic Dynamics · Physics 2019-05-01 Y. Sato , R. Klages

Local diffusion coefficients in disordered systems such as spin glass systems and living cells are highly heterogeneous and may change over time. Such a time-dependent and spatially heterogeneous environment results in irreproducibility of…

Statistical Mechanics · Physics 2016-12-21 Takuma Akimoto , Eiji Yamamoto

We present a general, physically motivated non-linear and non-local advection equation in which the diffusion of interacting random walkers competes with a local drift arising from a kind of peer pressure. We show, using a mapping to an…

Statistical Mechanics · Physics 2009-11-07 Fabio Cecconi , Matteo Marsili , Jayanth R. Banavar , Amos Maritan

Cell colonies of bacteria, tumour cells and fungi, under nutrient limited growth conditions, exhibit complex branched growth patterns. In order to investigate this phenomenon we present a simple hybrid cellular automaton model of cell…

Biological Physics · Physics 2007-05-23 P. Gerlee , A. R. A Anderson

When biological populations expand into new territory, the evolutionary outcomes can be strongly influenced by genetic drift, the random fluctuations in allele frequencies. Meanwhile, spatial variability in the environment can also…

Populations and Evolution · Quantitative Biology 2024-06-27 Jimmy Gonzalez Nuñez , Jayson Paulose , Wolfram Möbius , Daniel A. Beller

The time-asymptotic behavior of undamped, nonlinear oscillators with a random frequency is investigated analytically and numerically. We find that averaged quantities of physical interest, such as the oscillator's mechanical energy,…

Statistical Mechanics · Physics 2009-11-07 Kirone Mallick , Philippe Marcq

In order to analyze data from cancer genome sequencing projects, we need to be able to distinguish causative, or "driver," mutations from "passenger" mutations that have no selective effect. Toward this end, we prove results concerning the…

Populations and Evolution · Quantitative Biology 2013-02-13 Rick Durrett

We consider the speed of propagation of a {continuous-time continuous-space} branching random walk with the additional restriction that the birth rate at any spatial point cannot exceed $1$. The dispersion kernel is taken to have density…

Probability · Mathematics 2022-02-23 Viktor Bezborodov , Luca Di Persio , Tyll Krueger , Pasha Tkachov

We investigate the evolution of populations of random Boolean networks under selection for robustness of the dynamics with respect to the perturbation of the state of a node. The fitness landscape contains a huge plateau of maximum fitness…

Populations and Evolution · Quantitative Biology 2009-11-13 Tamara Mihaljev , Barbara Drossel

The paper is devoted to a reaction-diffusion equation with doubly nonlocal nonlinearity arising in various applications in population dynamics. One of the integral terms corresponds to the nonlocal consumption of resources while another one…

Pattern Formation and Solitons · Physics 2016-01-19 M. Banerjee , V. Vougalter , V. Volpert

We model and study the genetic evolution and conservation of a population of diploid hermaphroditic organisms, evolving continuously in time and subject to resource competition. In the absence of mutations, the population follows a 3-type…

Probability · Mathematics 2012-07-23 Camille Coron

We study the evolution of an initially random distribution of particles on a square lattice, under certain rules for `growing' and `culling' of particles. In one version we allow the particles to move laterally along the surface (mobile…

Soft Condensed Matter · Physics 2009-11-07 Tapati Dutta , Nikolai Lebovka , S. Tarafdar

The paper explores the influence of harvesting (or culling) on the outcome of the competition of two species in a spatially heterogeneous environment. The harvesting effort is assumed to be proportional to the space-dependent intrinsic…

Dynamical Systems · Mathematics 2019-05-01 Elena Braverman , Ilia Ilmer

When a biological population expands into new territory, genetic drift develops an enormous influence on evolution at the propagating front. In such range expansion processes, fluctuations in allele frequencies occur through stochastic…

Biological Physics · Physics 2018-12-24 Sherry Chu , Mehran Kardar , David R. Nelson , Daniel A. Beller

For a one-locus haploid infinite population with discrete generations, the celebrated Kingman's model describes the evolution of fitness distributions under the competition of selection and mutation, with a constant mutation probability.…

Probability · Mathematics 2021-06-01 Linglong Yuan

Dynamics of a particle diffusing in a confinement can be seen a sequence of bulk-diffusion-mediated hops on the confinement surface. Here, we investigate the surface hopping propagator that describes the position of the diffusing particle…

Statistical Mechanics · Physics 2020-09-23 Denis S. Grebenkov

Spread of information in crowd is analysed in terms of directed percolation in two-dimensional spatial network. We investigate the case when the information transmitted can be incomplete or damaged. The results indicate that for small or…

Physics and Society · Physics 2011-04-26 Krzysztof Malarz , Vikas Chandra , Eve Mitleton-Kelly , Krzysztof Kulakowski