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The occurrence of a critical period of plasticity in the visual cortex has long been established, yet its function in normal development is not fully understood. Here we show that as the late phase of the critical period unfolds, different…

Neurons and Cognition · Quantitative Biology 2015-05-13 Matthias Kaschube , Michael Schnabel , Siegrid Löwel , Fred Wolf

In this paper, we present a multi--layer, activity--dependent model for the joint development of ocular dominance (OD) columns and cytochrome oxidase (CO) blobs in primate primary visual cortex (V1). For simplicity, we focus on layers 4C…

Neurons and Cognition · Quantitative Biology 2022-08-24 Andrew M. Oster

Cortical circuits are characterized by exquisitely complex connectivity patterns that emerge during development from undifferentiated networks. The development of these circuits is governed by a combination of precise molecular cues that…

Neurons and Cognition · Quantitative Biology 2020-09-15 Joseph Olson , Gabriel Kreiman

The primary visual cortex of many mammals contains a continuous representation of visual space, with a roughly repetitive aperiodic map of orientation preferences superimposed. It was recently found that orientation preference maps (OPMs)…

Neurons and Cognition · Quantitative Biology 2015-03-19 Wolfgang Keil , Fred Wolf

Large-scale functional networks have been extensively studied using resting state functional magnetic resonance imaging. However, the pattern, organization, and function of fine-scale network activity remain largely unknown. Here we…

Neurons and Cognition · Quantitative Biology 2017-03-01 Kun-Han Lu , Jun Young Jeong , Haiguang Wen , Zhongming Liu

The surface morphology of the developing mammalian brain is crucial for understanding brain function and dysfunction. Computational modeling offers valuable insights into the underlying mechanisms for early brain folding. Recent findings…

Neurons and Cognition · Quantitative Biology 2024-09-06 Jixin Hou , Zhengwang Wu , Xianyan Chen , Li Wang , Dajiang Zhu , Tianming Liu , Gang Li , Xianqiao Wang

Mammalian brains span about 4 orders of magnitude in cortical volume and have to operate in different environments that require diverse behavioral skills. Despite these geometric and behavioral diversities, the examination of cerebral…

Neurons and Cognition · Quantitative Biology 2014-05-19 Jan Karbowski

Self-organization of neural circuitry is an appealing framework for understanding cortical development, yet its applicability remains unconfirmed. Models for the self-organization of neural circuits have been proposed, but experimentally…

Neurons and Cognition · Quantitative Biology 2009-11-13 Matthias Kaschube , Michael Schnabel , Fred Wolf

The dynamics of local cortical networks are irregular, but correlated. Dynamic excitatory--inhibitory balance is a plausible mechanism that generates such irregular activity, but it remains unclear how balance is achieved and maintained in…

Neurons and Cognition · Quantitative Biology 2020-04-28 Alan Eric Akil , Robert Rosenbaum , Krešimir Josić

Abnormal cortical folding patterns may be related to neurodevelopmental disorders such as lissencephaly and polymicrogyria. In this context, computational modeling is a powerful tool to provide a better understanding of the early brain…

Detailed knowledge of mechanical parameters such as cell elasticity, stiffness of the growth substrate, or traction stresses generated during axonal extensions is essential for understanding the mechanisms that control neuronal growth. Here…

Biological Physics · Physics 2013-04-05 Elise Spedden , James D. White , Elena N. Naumova , David L. Kaplan , Cristian Staii

Neuronal circuits arise as axons and dendrites extend, navigate, and connect to target cells. Axonal growth, in particular, integrates deterministic guidance from substrate mechanics and geometry with stochastic fluctuations generated by…

Biological Physics · Physics 2025-10-10 Cristian Staii

In animal experiments, the observed orientation preference (OP) and ocular dominance (OD) columns in the visual cortex of the brain show various pattern types. Here, we show that the different visual map formations in various species are…

Neurons and Cognition · Quantitative Biology 2013-05-29 Myoung Won Cho , Seunghwan Kim

Learning and memory may rely on the ability of neuronal circuits to reorganize by dendritic spine remodeling. We have looked for geometrical parameters of cortical circuits, which maximize information storage capacity associated with this…

Biological Physics · Physics 2007-05-23 Armen Stepanyants

Growth and shape formation in crowded multicellular assemblies arise from the interplay of chemical gradients, single-cell expansion and mechanical interactions, making it essential to understand how these processes jointly shape collective…

Soft Condensed Matter · Physics 2025-12-02 Ilias-Marios Sarris , Ramin Golestianian , Philip Bittihn

It is widely believed that the particular wiring observed within cortical columns boosts neural computation. We use rewiring of neural networks performing real-world cognitive tasks to study the validity of this argument. In a vast survey…

Neurons and Cognition · Quantitative Biology 2012-04-23 Ralph L. Stoop , Victor Saase , Clemens Wagner , Britta Stoop , Ruedi Stoop

The synaptic connectivity of cortical networks features an overrepresentation of certain wiring motifs compared to simple random-network models. This structure is shaped, in part, by synaptic plasticity that promotes or suppresses…

Neurons and Cognition · Quantitative Biology 2014-12-23 Gabriel Koch Ocker , Ashok Litwin-Kumar , Brent Doiron

For long it has been known that specific patterns of folding are necessary for an optimally functioning brain. For instance, lissencephaly and polymicrogyria can lead to severe mental retardation, short life expectancy, epileptic seizures,…

Biological Physics · Physics 2020-04-03 Lucas da Costa Campos , Raphael Hornung , Gerhard Gompper , Jens Elgeti , Svenja Caspers

Synaptic plasticity allows cortical circuits to learn new tasks and to adapt to changing environments. How do cortical circuits use plasticity to acquire functions such as decision-making or working memory? Neurons are connected in complex…

Neurons and Cognition · Quantitative Biology 2023-03-08 Néstor Parga , Luis Serrano-Fernández , Joan Falcó-Roget

Maintaining upright posture is a complex task governed by the integration of afferent sensorimotor and visual information with compensatory neuromuscular reactions. The objective of this work was to characterize the visual dependency and…

Quantitative Methods · Quantitative Biology 2019-02-28 KJ Edmunds , H Petersen , M Hassan , S Yassine , A Olivieri , F Barollo , R Friðriksdóttir , P Edmunds , MK Gíslason , A Fratini , P Gargiulo
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