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Various bacterial strains exhibit colonial branching patterns during growth on poor substrates. These patterns reflect bacterial cooperative self-organization and cybernetic processes of communication, regulation and control employed during…

Condensed Matter · Physics 2015-06-25 Ido Golding , Yonathan Kozlovsky , Inon Cohen , Eshel Ben-Jacob

While robotic perception has advanced rapidly in vision and touch, enabling robots to reason about indoor fungal contamination from weak, diffusion-dominated chemical signals remains an open challenge. We introduce Scensory, a…

Signal Processing · Electrical Eng. & Systems 2026-05-29 Yanbaihui Liu , Erica Babusci , Claudia K. Gunsch , Boyuan Chen

We observe that small drops of a Bacillus subtilis suspension deposited on agar strongly increase in volume while similar bacteria-void drops do not. By measuring the bacterial concentration within the drop at different heights, we show…

Soft Condensed Matter · Physics 2017-07-31 Marc Hennes , Julien Tailleur , Gaëlle Charron , Adrian Daerr

We consider the problem of identifying an infection source based only on an observed set of infected nodes in a network, assuming that the infection process follows a Susceptible-Infected-Susceptible (SIS) model. We derive an estimator…

Social and Information Networks · Computer Science 2013-09-17 Wuqiong Luo , Wee Peng Tay

Self-propelled bacteria are marvels of nature with a potential to power dynamic materials and microsystems of the future. The challenge is in commanding their chaotic behavior. By dispersing swimming Bacillus subtilis in a…

Soft Condensed Matter · Physics 2016-12-21 Chenhui Peng , Taras Turiv , Yubing Guo , Qi-Huo Wei , Oleg D. Lavrentovich

A hallmark of bacterial populations cultured in vitro is their homogeneity of growth, where the majority of cells display identical growth rate, cell size and content. Recent insights, however, have revealed that even cells growing in…

Quantitative Methods · Quantitative Biology 2022-06-07 Santosh Pandey , Yunsoo Park , Ankita Ankita , Gregory J. Phillips

Finding smell references in historic artworks is a challenging problem. Beyond artwork-specific challenges such as stylistic variations, their recognition demands exceptionally detailed annotation classes, resulting in annotation sparsity…

Computer Vision and Pattern Recognition · Computer Science 2025-09-19 Ahmed Sheta , Mathias Zinnen , Aline Sindel , Andreas Maier , Vincent Christlein

We propose new concepts in order to analyze and model the dependence structure between two time series. Our methods rely exclusively on the order structure of the data points. Hence, the methods are stable under monotone transformations of…

Statistics Theory · Mathematics 2015-02-02 Alexander Schnurr , Herold Dehling

Airborne contaminants, e.g., bacterial spores, are usually analyzed by time consuming microscopic, chemical and biological assays. Current research into real time laser spectroscopic detectors of such contaminants is based on e.g. resonant…

Using optical speckle scanning microscopy [1], we demonstrate that clear images of multiple cells can be obtained through biological scattering tissue, with subcellular resolution and good image quality, as long as the size of the imaging…

Optics · Physics 2023-07-19 Xin Yang , Ye Pu , Demetri Psaltis

Angular is one of the most widely adopted frameworks for developing large-scale, dynamic web applications. As projects increase in scope and complexity, developers face growing challenges in managing architecture and maintaining clean,…

Software Engineering · Computer Science 2026-05-01 Maykon Nunes , Emanuel Coutinho , Carla Bezerra , Ivan Machado

Bacteria possess diverse mechanisms to regulate their motility in response to environmental and physiological signals, enabling them to navigate complex habitats and adapt their behavior. Among these mechanisms, interspecies recognition…

Populations and Evolution · Quantitative Biology 2025-12-01 Mattia Mattei , David Soriano Paños , Mahantesh Halappanavar , Alex Arenas

The olfactory system employs responses of an ensemble of odorant receptors (ORs) to sense molecules and to generate olfactory percepts. Here we hypothesized that ORs can be viewed as 3D spatial filters that extract molecular features…

Machine Learning · Computer Science 2024-12-13 Sergey Shuvaev , Khue Tran , Khristina Samoilova , Cyrille Mascart , Alexei Koulakov

Bacteria are the unseen majority on our planet, with millions of species and comprising most of the living protoplasm. While current methods enable in-depth study of a small number of communities, a simple tool for breadth studies of…

Genomics · Quantitative Biology 2010-07-21 Amnon Amir , Or Zuk

The design of biologically-inspired wireless communication systems using bacteria as the basic element of the system is initially motivated by a phenomenon called \emph{Quorum Sensing}. Due to high randomness in the individual behavior of a…

Information Theory · Computer Science 2016-11-17 Arash Einolghozati , Mohsen Sardari , Faramarz Fekri

Context: Software specifications are usually written in natural language and may suffer from imprecision, ambiguity, and other quality issues, called thereafter, requirement smells. Requirement smells can hinder the development of a project…

Software Engineering · Computer Science 2024-04-18 Emanuele Gentili , Davide Falessi

Many bacterial species readily develop biofilms that act as a protective matrix against external challenge, e.g. from antimicrobial treatment. Therefore, biofilms are often responsible for persistent and recurring infections. Established…

When an X-ray area detector based on a single crystalline material, for instance, a state of the art hybrid pixel detector, is illuminated from a point source by monochromatic radiation, a pattern of lines appears which overlays the…

Instrumentation and Detectors · Physics 2014-08-01 Christian Gollwitzer , Michael Krumrey

Biological sequences do not come at random. Instead, they appear with particular frequencies that reflect properties of the associated system or phenomenon. Knowing how biological sequences are distributed in sequence space is thus a…

Biological Physics · Physics 2024-04-18 Wei-Chia Chen , Juannan Zhou , David M. McCandlish

Code smells as symptoms of poor design and implementation choices. Many times they are the result of so called technical debt. Our study showed that the interest in code smells research is increasing. However, most of the publications are…

Software Engineering · Computer Science 2018-02-19 Peter Kokol , Milan Zorman , Grega Zlahtic , Bojan Zlahtic