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Experimentally obtained X-ray diffraction (XRD) patterns can be difficult to solve, precluding the full characterization of materials, pharmaceuticals, and geological compounds. Herein, we propose a method based upon a multi-objective…

Materials Science · Physics 2024-07-09 Stefano Racioppi , Alberto Otero De la Roza , Samad Hajinazar , Eva Zurek

We introduce a new fingerprint that allows distinguishing between liquid-like and solid-like atomic environments. This fingerprint is based on an approximate expression for the entropy projected on individual atoms. When combined with a…

Materials Science · Physics 2020-04-10 Pablo M. Piaggi , Michele Parrinello

Bacterial communities such as biofilms are widely recognised as being important for survival and persistence of bacteria in harsh environments. Mechanistic models of biofilm growth indicate that the way in which the surface is seeded can…

Quantitative Methods · Quantitative Biology 2007-05-23 Leah R. Johnson

Learning to automatically perceive smell is becoming increasingly important with applications in monitoring the quality of food and drinks for healthy living. In todays age of proliferation of internet of things devices, the deployment of…

Machine Learning · Computer Science 2019-12-03 Kehinde Owoeye

In the age of social computing, finding interesting network patterns or motifs is significant and critical for various areas such as decision intelligence, intrusion detection, medical diagnosis, social network analysis, fake news…

Social and Information Networks · Computer Science 2022-04-07 Shuo Yu , Feng Xia , Yuchen Sun , Tao Tang , Xiaoran Yan , Ivan Lee

Because of the huge number of graphs possible even with a small number of nodes, inference on network structure is known to be a challenging problem. Generating large random directed graphs with prescribed probabilities of occurrences of…

Quantitative Methods · Quantitative Biology 2017-05-03 Frederic Y. Bois , Ghislaine Gayraud

Spreadsheets are commonly used in organizations as a programming tool for business-related calculations and decision making. Since faults in spreadsheets can have severe business impacts, a number of approaches from general software…

Software Engineering · Computer Science 2018-05-29 Patrick Koch , Konstantin Schekotihin , Dietmar Jannach , Birgit Hofer , Franz Wotawa

Various rod-shaped bacteria such as the canonical gram negative Escherichia coli or the well-studied gram positive Bacillus subtilis divide symmetrically after they approximately double their volume. Their size at division is not constant,…

Cell Behavior · Quantitative Biology 2015-06-18 Ariel Amir

The observation of neuron-like behaviour in bacteria, such as the occurrence of electric spiking and extended bioelectric signalling, points to the role of membrane dynamics in prokaryotes. Electrophysiology of bacteria, however, has been…

Biological Physics · Physics 2021-04-02 Giuseppe Maria Paternò , Gaia Bondelli , Guglielmo Lanzani

The origins of herbal medicines are important for their treatment effect, which could be potentially distinguished by electronic nose system. As the odor fingerprint of herbal medicines from different origins can be tiny, the discrimination…

Quantitative Methods · Quantitative Biology 2021-07-29 Li Liu , Xianghao Zhan , Ziheng Duan , Yi Wu , Rumeng Wu , Xiaoqing Guan , Zhan Wang , You Wang , Guang Li

A recent Science paper (Bushdid et al, 2014)[1] proposed that humans can discriminate between at least a trillion olfactory stimuli. Here we show that this claim is the result of a fragile estimation framework capable of producing nearly…

Neurons and Cognition · Quantitative Biology 2015-02-19 Richard C. Gerkin , Jason B. Castro

Early detection of disease outbreaks is of paramount importance to implementing intervention strategies to mitigate the severity and duration of the outbreak. We build methodology that utilizes the characteristic profile of disease…

Methodology · Statistics 2012-01-20 Michael D. Porter , Jarad B. Niemi , Brian J. Reich

Differential optical absorption spectroscopy (DOAS) is a powerful tool for detecting and quantifying trace gases in atmospheric chemistry \cite{Platt_Stutz08}. DOAS spectra consist of a linear combination of complex multi-peak multi-scale…

Numerical Analysis · Mathematics 2011-09-30 Y. Sun , L. M. Wingen , B. J. Finlayson-Pitts , J. Xin

Early detection and identification of pathogenic bacteria such as Escherichia coli (E. coli) is an essential task for public health. The conventional culture-based methods for bacterial colony detection usually take >24 hours to get the…

Animals use stereo sampling of odor concentration to localize sources and follow odor trails. We analyze the dynamics of a bilateral model that depends on the simultaneous comparison between odor concentrations detected by left and right…

Quantitative Methods · Quantitative Biology 2021-03-16 Nour Riman , Jonathan D. Victor , Sebastian D. Boie , Bard Ermentrout

Hypothesis: Bacterial contamination of surfaces poses a major threat to public health. Designing effective antibacterial or self-cleaning surfaces requires understanding how bacteria-laden droplets interact with solid substrates and how…

Soft Condensed Matter · Physics 2025-10-29 Sirshendu Misra , Sudip Shyam , Priyam Chakraborty , Sushanta K. Mitra

With more than 5500 detected exoplanets, the search for life is entering a new era. Using life on Earth as our guide, we look beyond green landscapes to expand our ability to detect signs of surface life on other worlds. While oxygenic…

Earth and Planetary Astrophysics · Physics 2024-04-17 Ligia Fonseca Coelho , Lisa Kaltenegger , Stephen Zinder , William Philpot , Taylor L. Price , Trinity L. Hamilton

Microarrays have become extremely useful for analysing genetic phenomena, but establishing a relation between microarray analysis results (typically a list of genes) and their biological significance is often difficult. Currently, the…

Quantitative Methods · Quantitative Biology 2007-05-23 Franck Rapaport , Andrei Zinovyev , Marie Dutreix , Emmanuel Barillot , Jean-Philippe Vert

We present remote Operating System detection as an inference problem: given a set of observations (the target host responses to a set of tests), we want to infer the OS type which most probably generated these observations. Classical…

Cryptography and Security · Computer Science 2010-06-11 Carlos Sarraute , Javier Burroni

Scattering obscures information carried by wave by producing a speckle pattern, posing a common challenge across various fields, including microscopy and astronomy. Traditional methods for extracting information from speckles often rely on…

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