Related papers: Thoughts on an Unified Framework for Artificial Ch…
In conceptual modeling (CM), humans apply abstraction to represent excerpts of reality for means of understanding and communication, and processing by machines. Artificial Intelligence (AI) is applied to vast amounts of data to…
As debates on potential societal harm from artificial intelligence (AI) culminate in legislation and international norms, a global divide is emerging in both AI regulatory frameworks and international governance structures. In terms of…
This document is written with the intention to describe in detail a method and means by which a computer program can reason about the world and in so doing, increase its analogue to a living system. As the literature is rife and it is…
As artificial intelligence (AI) models become routinely integrated into knowledge work, cognitive acts increasingly occur in two distinct modes: individually, using biological resources alone, or distributed across a human-AI system.…
Modern experimental platforms such as particle accelerators, fusion devices, telescopes, and industrial process control systems expose tens to hundreds of thousands of control and diagnostic channels accumulated over decades of evolution.…
Atomistic simulations are essential tools in chemistry and materials science, accelerating the discovery of novel catalysts, energy storage materials, and pharmaceuticals. However, running these simulations remains challenging due to the…
Since the advent of machine learning, interpretability has remained a persistent challenge, becoming increasingly urgent as generative models support high-stakes applications in drug and material discovery. Recent advances in large language…
Molecular circuits capable of autonomous learning could unlock novel applications in fields such as bioengineering and synthetic biology. To this end, existing chemical implementations of neural computing have mainly relied on emulating…
This paper proposes a novel framework for developing safe Artificial General Intelligence (AGI) by combining Active Inference principles with Large Language Models (LLMs). We argue that traditional approaches to AI safety, focused on…
Abstract separation systems are a new unifying framework in which separations of graph, matroids and other combinatorial structures can be expressed and studied. We characterize the abstract separation systems that have representations as…
We introduce a mathematical framework for retrosynthetic analysis, an important research method in synthetic chemistry. Our approach represents molecules and their interaction using string diagrams in layered props - a recently introduced…
Siphons in a chemical reaction system are subsets of the species that have the potential of being absent in a steady state. We present a characterization of minimal siphons in terms of primary decomposition of binomial ideals, we explore…
Large Language Models (LLMs) have emerged as powerful tools for accelerating scientific discovery, yet their static knowledge and hallucination issues hinder autonomous research applications. Recent advances integrate LLMs into agentic…
Artificial intelligence (AI) systems are being readily and rapidly adopted, increasingly permeating critical domains: from consumer platforms and enterprise software to networked systems with embedded agents. While this has unlocked…
Evolution produces complex and structured networks of interacting components in chemical, biological, and social systems. We describe a simple mathematical model for the evolution of an idealized chemical system to study how a network of…
This paper advances a methodological proposal for safety research in agentic AI. As systems acquire planning, memory, tool use, persistent identity, and sustained interaction, safety can no longer be analysed primarily at the level of the…
A concept of "evolving categories" is suggested to build a simple, scalable, mathematically consistent framework for representing in uniform way both data and algorithms. A state machine for executing algorithms becomes clear, rich and…
This article focuses on elucidating the concept of consciousness from a relational and post-phenomenological theory of non-human communication agents (ANHC). Specifically, we explore the contributions of Thomas Metzinger s Self Model…
The study of system complexity primarily has two objectives: to explore underlying patterns and to develop theoretical explanations. Pattern exploration seeks to clarify the mechanisms behind the emergence of system complexity, while…
We introduce weighted atom-centered symmetry functions (wACSFs) as descriptors of a chemical system's geometry for use in the prediction of chemical properties such as enthalpies or potential energies via machine learning. The wACSFs are…