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Using the classical technique of condensation of singularities, we prove that, for every zero-dimensional, complete separable metric space $G$, there exists a Suslinian, chainable metric continuum whose set of end points is homeomorphic to…

General Topology · Mathematics 2021-01-01 Jerzy Krzempek

New geometric structures that relate the lagrangian and hamiltonian formalisms defined upon a singular lagrangian are presented. Several vector fields are constructed in velocity space that give new and precise answers to several topics…

Mathematical Physics · Physics 2008-11-26 Xavier Gracia , Josep M. Pons

Many mechanical structures, both engineered and biological, combine heavy rigid elements such as bones and beams with lightweight flexible ones such as cables and membranes. These are referred to as tensegrities, reflecting that cables can…

Soft Condensed Matter · Physics 2025-08-27 Vishal Sudhakar , William Stephenson , James P. McInerney , D. Zeb Rocklin

This paper deepens into the analysis of the protein secondary structure using Frenet frame to describe the curvature and torsion of the discrete curve formed by the protein $\alpha$-carbons. We show how a simple criterion based on the…

Biological Physics · Physics 2025-12-08 M. Prados , M. D. Hernández de la Torre , F. de Soto

Inspired by the issue of stability of molecular structures, we investigate the strict minimality of point sets with respect to configurational energies featuring two- and three-body contributions. Our main focus is on characterizing those…

Combinatorics · Mathematics 2021-12-08 Laurent Bétermin , Manuel Friedrich , Ulisse Stefanelli

The hanging chain is a very instructive system for demonstrating more advanced methods and ideas for the analysis of normal modes of one-dimensional systems, beyond the standard ordinary (horizontal) string. Accordingly, the normal modes of…

Classical Physics · Physics 2015-06-23 Y. Verbin

A recent experiment [Son et al., Soft Matter, 2024, 20,2777-2788] showed that self-propelled particles confined within a circular boundary filled with granular medium spontaneously form a motile cluster that stays on the boundary. This…

Soft Condensed Matter · Physics 2025-06-23 Leonardo Garibaldi Rigon , Yongjoo Baek

A phenomenological model hamiltonian to describe the folding of a protein with any given sequence is proposed. The protein is thought of as a collection of pieces of helices; as a consequence its configuration space increases with the…

Soft Condensed Matter · Physics 2009-10-30 Pierpaolo Bruscolini

The ability of a protein to recognise multiple independent target conformations was demonstrated in [1]. Here we consider the recognition of correlated configurations, which we apply to funnel design for a single conformation. The maximum…

Soft Condensed Matter · Physics 2007-05-23 Robin C Ball , Thomas M A Fink

We characterize those closed $2k$-manifolds admitting smooth maps into $(k+1)$-manifolds with only finitely many critical points, for $k\in\{2,4\}$. We compute then the minimal number of critical points of such smooth maps for $k=2$ and,…

Geometric Topology · Mathematics 2016-04-08 Louis Funar

We develop a systematic method for analyzing the causal structure at vertices in (2+1)-dimensional Lorentzian simplicial gravity. By examining the intersection patterns of lightcones emanating from a vertex with its simplicial…

General Relativity and Quantum Cosmology · Physics 2025-12-08 Seth K. Asante , Björn Borgolte

This note aims to bring attention to a simple class of discrete dynamical systems exhibiting some complex behaviour. Each of these systems is defined as a self-mapping of the unit square and is obtained by coupling two families of…

Dynamical Systems · Mathematics 2012-01-20 Chris Preston

Alignments, i.e., position-wise comparisons of two or more strings or ordered lists are of utmost practical importance in computational biology and a host of other fields, including historical linguistics and emerging areas of research in…

Combinatorics · Mathematics 2018-10-19 Sarah J. Berkemer , Christian Höner zu Siederdissen , Peter F. Stadler

Proteins can combine into functional elements in living cells or self-assemble into unwanted structures in a number of diseases. The resulting aggregates often display filamentous morphologies across a large range of protein shapes and…

Soft Condensed Matter · Physics 2026-05-18 Elena N. Govorun , Martin Lenz

The entanglement-sharing properties of an infinite spin-chain are studied when the state of the chain is a pure, translation-invariant state with a matrix-product structure. We study the entanglement properties of such states by means of…

Quantum Physics · Physics 2009-11-10 F. Benatti , B. C. Hiesmayr , H. Narnhofer

Call a pure Hodge structure geometric if it is contained in the cohomology of a smooth complex projective variety. The main goal is to show that for any set of Hodge numbers (subject to the obvious constraints), there exists a geometric…

Algebraic Geometry · Mathematics 2014-12-05 Donu Arapura

We develop a rigidity theory for frameworks in $\mathbb{R}^3$ which have two coincident points but are otherwise generic and only infinitesimal motions which are tangential to a family of cylinders induced by the realisation are considered.…

Combinatorics · Mathematics 2016-07-08 Bill Jackson , Viktoria Kaszanitzky , Anthony Nixon

We continue the development of the study of the equisingularity of isolated singularities, in the determinantal case. This version of the paper includes a substantial amount of new material (76% larger). The new material introduces the idea…

Complex Variables · Mathematics 2016-01-05 Terence Gaffney , Antoni Rangachev

We study the singular affine structures of integrable systems with focus-focus singular fibers on the image of momentum maps. The classification of singular affine structures is equivalent to the classification of simple semitoric systems…

Symplectic Geometry · Mathematics 2024-01-22 Xiudi Tang

The protein folding problem has attracted an increasing attention from physicists. The problem has a flavor of statistical mechanics, but possesses the most common feature of most biological problems -- the profound effects of evolution. I…

Statistical Mechanics · Physics 2009-10-31 Chao Tang