Related papers: Singularities of Hinge Structures
We investigate topological properties of a completely integrable system on $S^2\times S^2 \times S^2$ which was recently shown to have a Lagrangian fiber diffeomorphic to $\mathbb{R} P^3$ not displaceable by a Hamiltonian isotopy [Oakley…
Chain molecules play important roles in industry and in living cells. Our focus here is on distinct ways of modeling the stiffness inherent in a chain molecule. We consider three types of stiffnesses -- one yielding an energy penalty for…
Two singular links are cobordant if one can be obtained from the other by singular link isotopy together with a combination of births or deaths of simple unknotted curves, and saddle point transformations. A movie description of a singular…
Mechanical stretching of secondary structures is studied through molecular dynamics simulations of a Go-like model. Force vs. displacement curves are studied as a function of the stiffness and velocity of the pulling device. The succession…
Rigidity analysis using the "pebble game" has been applied to protein crystal structures to obtain information on protein folding, assembly and t he structure-function relationship. However, previous work using this technique has not made…
We study the Renyi entropy of the one-dimensional XYZ spin-1/2 chain in the entirety of its phase diagram. The model has several quantum critical lines corresponding to rotated XXZ chains in their paramagnetic phase, and four tri-critical…
Self-assembly of structures from vertically aligned, charged dust particle bundles within a glass box placed on the lower, powered electrode of a RF GEC cell were produced and examined experimentally. Self-organized formation of…
The use of reduced models for investigating the self-assembly dynamics underlying protein shell formation in spherical viruses is described. The spontaneous self-assembly of these polyhedral, supramolecular structures, in which icosahedral…
This work is devoted to a systematic study of symplectic convexity for integrable Hamiltonian systems with elliptic and focus-focus singularities. A distinctive feature of these systems is that their base spaces are still smooth manifolds…
In three dimensions, the construction of bi-Hamiltonian structure can be reduced to the solutions of a Riccati equation with the arclength coordinate of a Frenet-Serret frame being the independent variable. Explicit integration of conserved…
Mechanical fields over thin elastic surfaces can develop singularities at isolated points and curves in response to constrained deformations (e.g., crumpling and folding of paper), singular body forces and couples, distributions of isolated…
We analyze the structure of matter representations arising from codimension two singularities in F-theory, focusing on gauge groups SU(N). We give a detailed local description of the geometry associated with several types of singularities…
The evolution of a large class of biological, physical and engineering systems can be studied through both dynamical systems theory and Hamiltonian mechanics. The former theory, in particular its specialization to study systems with…
The edges of torn plastic sheets and growing leaves often display hierarchical buckling patterns. We show that this complex morphology (i) emerges even in zero strain configurations, and (ii) is driven by a competition between the two…
Because of the double-helical structure of DNA, in which two strands of complementary nucleotides intertwine around each other, a covalently closed DNA molecule with no interruptions in either strand can be viewed as two interlocked…
The aim of this work is to study the geometry underlying mechanics and its application to describe autonomous and nonautonomous conservative dynamical systems of different types; as well as dissipative dynamical systems. We use different…
The protein folding problem must ultimately be solved on all length scales from the atomic up through a hierarchy of complicated structures. By analyzing the stability of the folding process using physics and mathematics, this paper shows…
We study the simplest singular points of Fredholm maps of index zero between Banach spaces, i.e. when the kernel of the Frechet derivative of the map has dimension one. Even in this relatively simple case we have a rich variety of…
The study of granular crystals, metamaterials that consist of closely packed arrays of particles that interact elastically, is a vibrant area of research that combines ideas from disciplines such as materials science, nonlinear dynamics,…
Dynamics of a self-gravitating shell of matter is derived from the Hilbert variational principle and then described as an (infinite dimensional, constrained) Hamiltonian system. A method used here enables us to define singular Riemann…