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We derive a course grained, continuum model of the 2D vertex model, applicable for different underlying geometries, and allowing for analytical analysis of an otherwise numerical model. Using a geometric approach and out--of--equilibrium…

Soft Condensed Matter · Physics 2022-08-31 Doron Grossman , Jean-Francois Joanny

Based on extensive study of a dynamical systems model of the development of a cell society, a novel theory for stem cell differentiation and its regulation is proposed as the ``chaos hypothesis''. Two fundamental features of stem cell…

Adaptation and Self-Organizing Systems · Physics 2007-05-23 Chikara Furusawa , Kunihiko Kaneko

The existence of global weak solutions to the compressible Navier-Stokes equations for the density of endothelial cells and their velocity, coupled to a reaction-diffusion equation for the concentration of the chemoattractant, is…

Analysis of PDEs · Mathematics 2026-04-28 Ansgar Jüngel , Flora Philipp

We study the chiral-imbalance and the Weibel instabilities in presence of the quantum anomaly using the Berry-curvature modified kinetic equation. We argue that in many realistic situations, e.g. relativistic heavy-ion collisions, both the…

High Energy Physics - Theory · Physics 2016-12-21 Avdhesh Kumar , Jitesh. R. Bhatt , Predhiman. K. Kaw

Populations can become spatially organised through chemotaxis autoattraction, wherein population members release their own chemoattractant. Standard models of this process usually assume phenotypic homogeneity, but recent studies have shed…

Populations and Evolution · Quantitative Biology 2025-06-05 Tommaso Lorenzi , Kevin J. Painter

Cellular aggregates play a significant role in the evolution of biological systems such as tumor growth, tissue spreading, wound healing, and biofilm formation. Analysis of such biological systems, in principle, includes examining the…

Numerical Analysis · Mathematics 2022-08-17 Soheil Firooz , Stefan Kaessmair , Vasily Zaburdaev , Ali Javili , Paul Steinmann

The Jeans criterion is one cornerstone in our understanding of gravitational fragmentation. A critical limitation of the Jeans criterion is that the background density is assumed to be a constant, which is often not true in dynamic…

Astrophysics of Galaxies · Physics 2024-01-30 Guang-Xing Li

The interplay between cellular growth and cell-cell signaling is essential for the aggregation and proliferation of bacterial colonies, as well as for the self-organization of cell tissues. To investigate this interplay, we focus here on…

The complex physics of self-assembly in colloidal crystals on deformable interfaces and surfaces poses interesting possibilities for the designability and synthesis of next-generation metamaterials. The goal of this article is to…

Soft Condensed Matter · Physics 2025-06-23 Sanjay Dharmavaram , Basant Lal Sharma

Energetic astrophysical phenomena, such as $\gamma$-ray bursts, supernova explosions, and magnetar flares occur in collisionless plasmas and involve various plasma kinetic and magnetohydrodynamic instabilities. In this paper, we explore the…

Plasma Physics · Physics 2025-10-27 Michael C. Sitarz

In this work lipid ordering phase changes arising in planar membrane bilayers is investigated both accounting for elas- ticity alone and for effective viscoelastic response of such assemblies. The mechanical response of such membranes is…

Soft Condensed Matter · Physics 2015-10-16 L. Deseri , P. Pollaci , M. Zingales , K. Dayal

The Keller-Segel model is a well-known system representing chemotaxis in living organisms. We study the convergence of a generalized nonlinear variant of the Keller-Segel to the degenerate Cahn-Hilliard system. This analysis is made…

Analysis of PDEs · Mathematics 2023-02-13 Charles Elbar , Benoît Perthame , Alexandre Poulain

We analyze the existence, linear stability, and slow dynamics of localized 1D spike patterns for a Keller--Segel model of chemotaxis that includes the effect of logistic growth of the cellular population. Our analysis of localized patterns…

Analysis of PDEs · Mathematics 2023-08-01 Fanze Kong , Michael Ward , Juncheng Wei

The existence of travelling waves for a model of concentration waves of bacteria is investigated. The model consists in a kinetic equation for the biased motion of cells following a run-and-tumble process, coupled with two…

Analysis of PDEs · Mathematics 2016-07-05 Vincent Calvez

For the first time the phenomenon of cellular structure coarsening are consistently analysed from the positions of kinetic, hydrodynamic and stochastodynamic theories of nonequilibrium statistical systems. Thereby micro-, meso- and…

Condensed Matter · Physics 2015-06-25 S. B. Goryachev

The phenomenon where cells with elongated protrusions, such as neurons, communicate by contacting other cells and arrange themselves appropriately is termed cell sorting through haptotaxis. This phenomenon is described by partial…

Analysis of PDEs · Mathematics 2026-01-01 Hiroshi Ishii , Hideki Murakawa , Yoshitaro Tanaka

We present a model for continuous cell culture coupling intra-cellular metabolism to extracellular variables describing the state of the bioreactor, taking into account the growth capacity of the cell and the impact of toxic byproduct…

Molecular Networks · Quantitative Biology 2017-11-21 Jorge Fernandez-de-Cossio-Diaz , Kalet León , Roberto Mulet

The linear stability analysis of an uniform shear flow of granular materials is revisited using several cases of a Navier-Stokes'-level constitutive model in which we incorporate the global equation of states for pressure and thermal…

Soft Condensed Matter · Physics 2008-11-18 Meheboob Alam , Priyanka Shukla , Stefan Luding

A class of parabolic-parabolic Keller-Segel systems with degenerate diffusion and volume filling is studied in a bounded domain subject to no-flux boundary conditions. The equations are derived from a multiphase fluid model. The interplay…

Analysis of PDEs · Mathematics 2026-05-21 Noah Geltner , Ansgar Jüngel , Mingyue Zhang

Micro-organisms aggregate through chemotaxis against a concentration gradient of signals secreted by themselves. We have numerically studied a model consisting of elements with intracellular dynamics, random walks with a state-dependent…

Statistical Mechanics · Physics 2007-10-31 Masayo Inoue , Kunihiko Kaneko