Related papers: Common Permutation Problem
In this paper we consider the following problems: how many different subsets of Sigma^n can occur as set of all length-n factors of a finite word? If a subset is representable, how long a word do we need to represent it? How many such…
Based on character decomposition, a dual transformation is introduced leading to two formulations of the theory which should allow for a removal/softening of the sign problem in the original version. Very preliminar numerical results are…
In this paper, we prove that the MaxCut problem is NP-complete on permutation graphs, settling a long-standing open problem that appeared in the 1985 column of the "Ongoing Guide to NP-completeness" by David S. Johnson.
In this paper we show that a generalized version of the Nikoli puzzle Slant is NP-complete. We also give polynomial time algorithms for versions of the puzzle where some constraints are omitted. These problems correspond to simultaneously…
A $k$-attractor is a combinatorial object unifying dictionary-based compression. It allows to compare the repetitiveness measures of different dictionary compressors such as Lempel-Ziv 77, the Burrows-Wheeler transform, straight line…
The Permutation Pattern Matching problem asks, given two permutations $\sigma$ on $n$ elements and $\pi$, whether $\sigma$ admits a subsequence with the same relative order as $\pi$ (or, in the counting version, how many such subsequences…
We investigate the constrained synchronization problem for weakly acyclic, or partially ordered, input automata. We show that, for input automata of this type, the problem is always in NP. Furthermore, we give a full classification of the…
The Permutation Pattern Matching problem, asking whether a pattern permutation $\pi$ is contained in a permutation $\tau$, is known to be NP-complete. In this paper we present two polynomial time algorithms for special cases. The first…
In a simple pattern matching problem one has a pattern $w$ and a text $t$, which are words over a finite alphabet $\Sigma$. One may ask whether $w$ occurs in $t$, and if so, where? More generally, we may have a set $P$ of patterns and a set…
Separation is a classical problem asking whether, given two sets belonging to some class, it is possible to separate them by a set from a smaller class. We discuss the separation problem for regular languages. We give a Ptime algorithm to…
Let $r\geq 3$ be any positive integer which is relatively prime to $p$ and $q^2\equiv 1 \pmod r$. Let $\tau_1, \tau_2$ be any permutation polynomials over $\mathbb{F}_{q^2},$ $\sigma_M$ is an invertible linear map over $\mathbb{F}_{q^2}$…
The circular peak set of a permutation $\sigma$ is the set $\{\sigma(i)\mid \sigma(i-1)<\sigma(i)>\sigma(i+1)\}$. In this paper, we focus on the enumeration problems for permutations by circular peak sets. Let $cp_n(S)$ denote the number of…
We consider the problem of sequencing a set of positive numbers. We try to find the optimal sequence to maximize the variance of its partial sums. The optimal sequence is shown to have a beautiful structure. It is interesting to note that…
If a string is cyclically shifted it will re-appear after a certain number of shifts, which will be called its order. We solve the problem of how many strings exist with a given order. This problem arises in the context of quantum mechanics…
A PSCA$(v, t, \lambda)$ is a multiset of permutations of the $v$-element alphabet $\{0, \dots, v-1\}$ such that every sequence of $t$ distinct elements of the alphabet appears in the specified order in exactly $\lambda$ of the permutations.…
A weighted string, also known as a position weight matrix, is a sequence of probability distributions over some alphabet. We revisit the Weighted Shortest Common Supersequence (WSCS) problem, introduced by Amir et al. [SPIRE 2011], that is,…
A permutation $\sigma \in S_n$ is a $k$-superpattern (or $k$-universal) if it contains each $\tau \in S_k$ as a pattern. This notion of "superpatterns" can be generalized to words on smaller alphabets, and several questions about…
The problem of matching a query string to a directed graph, whose vertices are labeled by strings, has application in different fields, from data mining to computational biology. Several variants of the problem have been considered,…
We consider the complexities of substitutive sequences over a binary alphabet. By studying various types of special words, we show that, knowing some initial values, its complexity can be completely formulated via a recurrence formula…
A permutiple is the product of a digit preserving multiplication, that is, a number which is an integer multiple of some permutation of its digits. Certain permutiple problems, particularly transposable, cyclic, and, more recently,…