Related papers: Pseudoknot RNA structures with arc-length $\ge 4$

It has been long--conjectured that the crossing number cr(K_m,n) of the complete bipartite graph K_m,n equals the Zarankiewicz Number Z(m,n):= floor((m-1)/2) floor(m/2) floor((n-1)/2) floor(n/2). Another long--standing conjecture states…

Let $n,k,s$ be three integers and $\beta$ be a sufficiently small positive number such that $k\geq 3$, $0<1/n\ll \beta\ll 1/k$ and $ks+k\leq n\leq (1+\beta)ks+k-2$. A $k$-graph is called non-trivial if it has no isolated vertex. In this…

The nonorientable four-ball genus of a knot K is the smallest first Betti number of any smoothly embedded, nonorientable surface F in B^4 bounding K. In contrast to the orientable four-ball genus, which is bounded below by the Murasugi…

In STOC'95 \cite{ADMSS95} Arya et al.\ showed that for any set of $n$ points in $\mathbb R^d$, a $(1+\epsilon)$-spanner with diameter at most 2 (respectively, 3) and $O(n \log n)$ edges (resp., $O(n \log \log n)$ edges) can be built in $O(n…

A topological RNA structure is derived from a diagram and its shape is obtained by collapsing the stacks of the structure into single arcs and by removing any arcs of length one. Shapes contain key topological, information and for fixed…

In this paper we compute the bivariate generating function of $\gamma$-matchings over two backbones, filtered by the number of arcs and the topological genus. $\gamma$-matchings over two backbones are chord-diagrams, obtained via…

We describe rational knots with any of the possible combinations of the properties (a)chirality, (non-)positivity, (non-)fiberedness, and unknotting number one (or higher), and determine exactly their number for a given number of crossings…

Let c(K;F) denote the surface crossing number of a knot K with respect to a closed connected surface F in S^3. We relate c(K;F) to the tunnel number t(K) and to the Heegaard deficiency delta(F)=g(M_1;F)+g(M_2;F)-g(F), where S^3=M_1 union_F…

In this paper, we use semidefinite programming and representation theory to compute new lower bounds on the crossing number of the complete bipartite graph $K_{m,n}$, extending a method from de Klerk et al. [SIAM J. Discrete Math. 20…

We say that a word $w$ of length $kn$ is a $k$-\textit{antipower} if it can be written in the form $w_1 \cdots w_k$, where each $w_i$ is a distinct word of length $n$. We analyze prefixes of the Thue-Morse word $\textbf{t}$ and lengths of…

An elementary, at the undergraduate level derivation is given of precise upper bounds of the number of various RNA secondary structures. The method works when the generating function has multiple singularities at the circle of convergence,…

We introduce the \textit{crossing profile} of a drawing of a graph. This is a sequence of integers whose $(k+1)^{\text{th}}$ entry counts the number of edges in the drawing which are involved in exactly $k$ crossings. The first and second…

In this paper we give a very elementary proof that if A and B are subsets of {1,2,...,N}, each having at least 5N^{1 - (4(k-1))^{-1}} elements, then the sumset A+B has a k-term arithmetic progression.

Let $n\geqslant 4$ be a natural number, and let $K$ be a set $K\subseteq [n]:={1,2,...,n}$. We study the problem to find the smallest possible size of a maximal family $\mathcal{A}$ of subsets of $[n]$ such that $\mathcal{A}$ contains only…

The ropelength of a knot is the minimum contour length of a tube of unit radius that traces out the knot in three dimensional space without self-overlap, colloquially the minimum amount of rope needed to tie a given knot. Theoretical upper…

We revisit the asymptotic analysis of probabilistic construction of adjacency matrices of expander graphs proposed in [4]. With better bounds we derived a new reduced sample complexity for the number of nonzeros per column of these…

Let $G$ be a permutation group of degree $n$, and $k$ a positive integer with $k\le n$. We say that $G$ has the $k$-existential property, or $k$-et for short, if there exists a $k$-subset $A$ of the domain $\Omega$ such that, for any…

Given a complete simple topological graph $G$, a $k$-face generated by $G$ is the open bounded region enclosed by the edges of a non-self-intersecting $k$-cycle in $G$. Interestingly, there are complete simple topological graphs with the…

We investigate which chordal graphs have a representation as intersection graphs of pseudosegments. For positive we have a construction which shows that all chordal graphs that can be represented as intersection graph of subpaths on a tree…

We provide a new lower bound on the number of $(\leq k)$-edges of a set of $n$ points in the plane in general position. We show that for $0 \leq k \leq\lfloor\frac{n-2}{2}\rfloor$ the number of $(\leq k)$-edges is at least $$ E_k(S) \geq…