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We consider random geometric graphs on the plane characterized by a non-uniform density of vertices. In particular, we introduce a graph model where $n$ vertices are independently distributed in the unit disc with positions, in polar…

Disordered Systems and Neural Networks · Physics 2022-04-06 C. T. Martinez-Martinez , J. A. Mendez-Bermudez , Francisco A. Rodrigues , Ernesto Estrada

In this paper, a new measurement to compare two large-scale graphs based on the theory of quantum probability is proposed. An explicit form for the spectral distribution of the corresponding adjacency matrix of a graph is established. Our…

Discrete Mathematics · Computer Science 2018-07-03 Hayoung Choi , Hosoo Lee , Yifei Shen , Yuanming Shi

The spectral properties of the adjacency (connectivity) and distance matrix for various types of networks: exponential, scale-free (Albert--Barabasi) and classical random ones (Erdos--Renyi) are evaluated. The graph spectra for dense graph…

Disordered Systems and Neural Networks · Physics 2008-07-03 K. Malarz

In order to conduct a statistical analysis on a given set of phylogenetic gene trees, we often use a distance measure between two trees. In a statistical distance-based method to analyze discordance between gene trees, it is a key to decide…

Populations and Evolution · Quantitative Biology 2016-02-05 Jing Xi , Jin Xie , Ruriko Yoshida

In a model of a connected network on random points in the plane, one expects that the mean length of the shortest route between vertices at distance $r$ apart should grow only as $O(r)$ as $r \to \infty$, but this is not always easy to…

Probability · Mathematics 2009-11-30 David J. Aldous

High order networks are weighted hypergraphs col- lecting relationships between elements of tuples, not necessarily pairs. Valid metric distances between high order networks have been defined but they are difficult to compute when the…

Social and Information Networks · Computer Science 2016-05-04 Weiyu Huang , Alejandro Ribeiro

In Francis and Steel (2015), it was shown that there exists non-trivial networks on $4$ leaves upon which the distance metric affords a metric on a tree which is not the base tree of the network. In this paper we extend this result in two…

Populations and Evolution · Quantitative Biology 2019-06-06 Michael Hendriksen

Consider a rooted infinite Galton-Watson tree with mean offspring number $m>1$, and a collection of i.i.d. positive random variables $\xi_e$ indexed by all the edges in the tree. We assign the resistance $m^d \xi_e$ to each edge $e$ at…

Probability · Mathematics 2018-05-21 Dayue Chen , Yueyun Hu , Shen Lin

This paper presents methods to compare high order networks, defined as weighted complete hypergraphs collecting relationship functions between elements of tuples. They can be considered as generalizations of conventional networks where only…

Social and Information Networks · Computer Science 2016-01-20 Weiyu Huang , Alejandro Ribeiro

Graphs drawn in the plane are ubiquitous, arising from data sets through a variety of methods ranging from GIS analysis to image classification to shape analysis. A fundamental problem in this type of data is comparison: given a set of such…

Computational Geometry · Computer Science 2022-10-20 Levent Batakci , Abigail Branson , Bryan Castillo , Candace Todd , Erin Wolf Chambers , Elizabeth Munch

We consider the problem of estimating species trees from unrooted gene tree topologies in the presence of incomplete lineage sorting, a common phenomenon that creates gene tree heterogeneity in multilocus datasets. One popular class of…

Populations and Evolution · Quantitative Biology 2018-12-21 Sebastien Roch

We investigate a network model based on an infinite regular square lattice embedded in the Euclidean plane where the node connection probability is given by the geometrical distance of nodes. We show that the degree distribution in the…

Physics and Society · Physics 2008-06-23 Matus Medo , Jan Smrek

The structure of the Internet at the Autonomous System (AS) level has been studied by both the Physics and Computer Science communities. We extend this work to include features of the core and the periphery, taking a radial perspective on…

Networking and Internet Architecture · Computer Science 2007-05-23 Petter Holme , Josh Karlin , Stephanie Forrest

In spatial networks vertices are arranged in some space and edges may cross. When arranging vertices in a 1-dimensional lattice edges may cross when drawn above the vertex sequence as it happens in linguistic and biological networks. Here…

Discrete Mathematics · Computer Science 2020-02-24 Lluís Alemany-Puig , Ramon Ferrer-i-Cancho

We study complex networks under random matrix theory (RMT) framework. Using nearest-neighbor and next-nearest-neighbor spacing distributions we analyze the eigenvalues of adjacency matrix of various model networks, namely, random,…

Statistical Mechanics · Physics 2009-11-13 Sarika Jalan , Jayendra N. Bandyopadhyay

Public transport routes sharing the same grid of streets and tracks are often found to proceed in parallel along shorter or longer sequences of stations. Similar phenomena are observed in other networks built with space consuming links such…

Physics and Society · Physics 2015-05-13 B. Berche , C. von Ferber , T. Holovatch

Geometry of networks endowed with a causal structure is discussed using the conventional framework of equilibrium statistical mechanics. The popular growing network models appear as particular causal models. We focus on a class of tree…

Statistical Mechanics · Physics 2009-11-07 P. Bialas , Z. Burda , J. Jurkiewicz , A. Krzywicki

Let $\mathcal{T}_n$ denote the set of all unrooted and unlabeled trees with $n$ vertices, and $(i,j)$ a double-star. By assuming that every tree of $\mathcal{T}_n$ is equally likely, we show that the limiting distribution of the number of…

Combinatorics · Mathematics 2010-03-26 Xueliang Li , Yiyang Li

We generalize the asymptotic behavior of the graph distance between two uniformly chosen nodes in the configuration model to a wide class of random graphs. Among others, this class contains the Poissonian random graph, the expected degree…

Probability · Mathematics 2008-05-19 Henri van den Esker , Remco van der Hofstad , Gerard Hooghiemstra

Complex systems, ranging from soft materials to wireless communication, are often organised as random geometric networks in which nodes and edges evenly fill up the volume of some space. Studying such networks is difficult because they…

Probability · Mathematics 2022-07-19 Ivan Kryven , Rik Versendaal
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