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In this paper we show that living cells can multiplex biochemical signals, i.e. transmit multiple signals through the same signaling pathway simultaneously, and yet respond to them very specifically. We demonstrate how two binary input…

Molecular Networks · Quantitative Biology 2012-06-01 Wiet de Ronde , Filipe Tostevin , Pieter Rein ten Wolde

Molecular recognition, which is essential in processing information in biological systems, takes place in a crowded noisy biochemical environment and requires the recognition of a specific target within a background of various similar…

Biomolecules · Quantitative Biology 2010-07-27 Yonatan Savir , Tsvi Tlusty

Understanding the memory capacity of neural networks remains a challenging problem in implementing artificial intelligence systems. In this paper, we address the notion of capacity with respect to Hopfield networks and propose a dynamic…

Neural and Evolutionary Computing · Computer Science 2017-09-19 Saarthak Sarup , Mingoo Seok

DNA-based data storage has been attracting significant attention due to its extremely high data storage density, low power consumption, and long duration compared to conventional data storage media. Despite the recent advancements in DNA…

Information Theory · Computer Science 2024-11-12 Yi Ding , Xuan He , Tuan Thanh Nguyen , Wentu Song , Zohar Yakhini , Eitan Yaakobi , Linqiang Pan , Xiaohu Tang , Kui Cai

We investigate a nonlinear dynamical system which ``remembers'' preselected values of a system parameter. The deterministic version of the system can encode many parameter values during a transient period, but in the limit of long times,…

Condensed Matter · Physics 2009-10-31 M. L. Povinelli , S. N. Coppersmith , L. P. Kadanoff , S. R. Nagel , S. C. Venkataramani

The high-fidelity storage of quantum information is crucial for quantum computation and communication. Many experimental platforms for these applications exhibit highly biased noise, with good resilience to spin depolarisation undermined by…

Quantum Physics · Physics 2023-05-31 Yannick Seis , Benjamin J. Brown , Anders S. Sørensen , Joseph F. Goodwin

Persistent phosphor has emerged as a promising candidate for information storage due to the rapid accessibility and low-energy requirements. However, the low storage capacity has limited its practical application. Herein, we skillfully…

Optics · Physics 2024-10-30 Dangli Gao , Zhigang Wang , Xiangyu Zhang , Qing Pang , Xiaojun Wang

With the broad recent research on ferroelectric hafnium oxide for non-volatile memory technology, depolarization effects in HfO2-based ferroelectric devices gained a lot of interest. Understanding the physical mechanisms regulating the…

Emerging Technologies · Computer Science 2025-08-13 Luca Fehlings , Thomas Mikolajick , Beatriz Noheda , Erika Covi

Memories are stored, at least partly, as patterns of strong synapses. Given molecular turnover, how can synapses maintain strong for the years that memories can persist? Some models postulate that biochemical bistability maintains strong…

Neurons and Cognition · Quantitative Biology 2015-04-09 Paul Smolen

Long-duration quantum memories for photonic qubits are essential components for achieving long-distance quantum networks and repeaters. The mapping of optical states onto coherent spin-waves in rare earth ensembles is a particularly…

Quantum Physics · Physics 2022-03-24 Antonio Ortu , Adrian Holzäpfel , Jean Etesse , Mikael Afzelius

We consider error-correcting coding for deoxyribonucleic acid (DNA)-based storage using nanopore sequencing. We model the DNA storage channel as a sampling noise channel where the input data is chunked into $M$ short DNA strands, which are…

Information Theory · Computer Science 2024-06-21 Lorenz Welter , Roman Sokolovskii , Thomas Heinis , Antonia Wachter-Zeh , Eirik Rosnes , Alexandre Graell i Amat

Memories are stored, retained, and recollected through complex, coupled processes operating on multiple timescales. To understand the computational principles behind these intricate networks of interactions we construct a broad class of…

Neurons and Cognition · Quantitative Biology 2015-07-29 Marcus K. Benna , Stefano Fusi

Cells receive signaling molecules by receptors and relay information via sensory networks so that they can respond properly depending on the type of signal. Recent studies have shown that cells can extract multi-dimensional information from…

Biological Physics · Physics 2018-02-14 Yoshihiko Hasegawa

For the last decade quantum memories have been intensively studied for potential applications to quantum information and communications using atomic and ionic ensembles. With the importance of a multimode storage capability in quantum…

Quantum Physics · Physics 2010-09-02 Byoung S. Ham

Beyond the genetic code, there is another layer of information encoded as chemical modifications on histone proteins positioned along the DNA. Maintaining these modifications is crucial for survival and identity of cells. How the…

Genomics · Quantitative Biology 2020-05-15 Nithya Ramakrishnan , Sibi Raj B Pillai , Ranjith Padinhateeri

Studies on the role of fluctuations in signal propagation and on gene regulation in monoclonal bacterial population have been extensively pursued based on the machinery of two-component system. The bacterial two-component system shows noise…

Molecular Networks · Quantitative Biology 2017-01-10 Tarunendu Mapder , Sudip Chattopadhyay , Suman K Banik

Quantum memory is a central component for quantum information processing devices, and will be required to provide high-fidelity storage of arbitrary states, long storage times and small access latencies. Despite growing interest in applying…

Various near-term quantum networking applications will benefit from low-loss, fiber-coupled photonic quantum memory devices with high efficiencies. We demonstrate a fiber-coupled loop-and-switch quantum memory platform with a pass-through…

Quantum Physics · Physics 2025-10-23 Sandra Cheng , Carson Evans , Todd Pittman

A coding scheme is introduced, allowing to store a set of linked bit strings in planar magnetic nanoelements with holes. Analytical expressions for the corresponding magnetization distributions are developed up to a homotopy and the…

Mesoscale and Nanoscale Physics · Physics 2023-08-02 Konstantin L. Metlov

DNA storage has emerged as a promising solution for large-scale and long-term data preservation. Among various error types, insertions are the most frequent errors occurring in DNA sequences, where the inserted symbol is often identical or…

Information Theory · Computer Science 2026-04-07 Hengfeng Liu , Chunming Tang , Cuiling Fan
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