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The ability to transmit quantum states over long distances is a fundamental requirement of the quantum internet and is reliant upon quantum repeaters. Quantum repeaters involve entangled photon sources that emit and deliver photonic…

In this paper we extend our investigations on noise-assisted storage devices through the experimental study of a loop composed of a single Schmitt trigger and an element that introduces a finite delay. We show that such a system allows the…

Adaptation and Self-Organizing Systems · Physics 2015-05-27 G. Bellomo , G. A. Patterson , P. I. Fierens , D. F. Grosz

Quantum correlations in an entangled many-body system are capable of storing information. Even when the information is injected by a local unitary operation to the system, the entanglement delocalizes it. In a recent study on multiple-qubit…

Quantum Physics · Physics 2020-06-04 Koji Yamaguchi , Masahiro Hotta

In view of the relation between information and thermodynamics we investigate how much information about an external protocol can be stored in the memory of a stochastic measurement device given an energy budget. We consider a layered…

Quantitative Methods · Quantitative Biology 2015-07-28 Stefano Bo , Marco Del Giudice , Antonio Celani

The faithful storage of a quantum bit of light is essential for long-distance quantum communication, quantum networking and distributed quantum computing. The required optical quantum memory must, first, be able to receive and recreate the…

Due to its longevity and enormous information density, DNA is an attractive medium for archival storage. In this work, we study the fundamental limits and trade-offs of DNA-based storage systems by introducing a new channel model, which we…

Information Theory · Computer Science 2020-01-20 Ilan Shomorony , Reinhard Heckel

The dual phosphorylation network provides an essential component of intracellular signaling, affecting the expression of phenotypes and cell metabolism. For particular choices of kinetic parameters, this system exhibits multistationarity, a…

Optimization and Control · Mathematics 2024-09-25 May Cai , Matthias Himmelmann , Birte Ostermann

Cells in a developing embryo have no direct way of "measuring" their physical position. Through a variety of processes, however, the expression levels of multiple genes come to be correlated with position, and these expression levels thus…

Molecular Networks · Quantitative Biology 2012-01-04 Julien O. Dubuis , Gasper Tkacik , Eric F. Wieschaus , Thomas Gregor , William Bialek

We investigate the capacity of noisy frequency-based channels, motivated by DNA data storage in the short-molecule regime, where information is encoded in the frequency of items types rather than their order. The channel output is a…

Information Theory · Computer Science 2026-01-16 Yuval Gerzon , Ilan Shomorony , Nir Weinberger

The DNA storage channel is considered, in which the $M$ Deoxyribonucleic acid (DNA) molecules comprising each codeword are stored without order, sampled $N$ times with replacement, and then sequenced over a discrete memoryless channel. For…

Information Theory · Computer Science 2022-02-15 Nir Weinberger , Neri Merhav

Nowadays a bit is no longer a mere abstraction but a physical quantity whose manipulation governs both operation of modern technologies and theoretical frontiers of fundamental science. In this work we propose a setup in which the memory…

Statistical Mechanics · Physics 2025-10-28 Mateusz Wiśniewski , Jakub Spiechowicz

This work concerns the question of how two important dynamical properties, oscillations and bistability, emerge in an important biological signaling network. Specifically, we consider a model for dual-site phosphorylation and…

Molecular Networks · Quantitative Biology 2019-03-08 Nida Obatake , Anne Shiu , Xiaoxian Tang , Angelica Torres

Synaptic plasticity is metabolically expensive, yet animals continuously update their internal models without exhausting energy reserves. However, when artificial neural networks are trained, the network parameters are typically updated on…

Artificial Intelligence · Computer Science 2026-04-17 Aaron Pache , Mark CW van Rossum

There is an urgent need to enhance the storage density of memory devices to accommodate the exponentially increasing amount of data generated by humankind. In this work, we describe Magnonic Combinatorial Memory (MCM), where the bits of…

Other Condensed Matter · Physics 2025-09-15 Mykhaylo Balinskiy , Paulo Julio , Jeffrey Vargas , Diana Balaguer , Alexander Khitun

The emerging field of DNA storage employs strands of DNA bases (A/T/C/G) as a storage medium for digital information to enable massive density and durability. The DNA storage pipeline includes: (1) encoding the raw data into sequences of…

Genomics · Quantitative Biology 2025-01-28 Hadas Abraham , Barak Gahtan , Adir Kobovich , Orian Leitersdorf , Alex M. Bronstein , Eitan Yaakobi

DNA is a leading candidate as the next archival storage media due to its density, durability and sustainability. To read (and write) data DNA storage exploits technology that has been developed over decades to sequence naturally occurring…

Emerging Technologies · Computer Science 2022-05-12 Jasmine Quah , Omer Sella , Thomas Heinis

Exponential increase of data has motivated advances of data storage technologies. As a promising storage media, DeoxyriboNucleic Acid (DNA) storage provides a much higher data density and superior durability, compared with state-of-the-art…

Information Theory · Computer Science 2023-11-14 Luping Xiang , Qiang Liu , Sirong Chen , Kang Yan , Wenfeng Wu , Kun Yang

A cornerstone of our understanding of both biological and artificial neural networks is that they store information in the strengths of synaptic connections among the neurons. However, in contrast to the well-established theory for…

Neurons and Cognition · Quantitative Biology 2026-04-29 Xinhao Fan , Shreesh P Mysore

Motivated by DNA-based storage, we study the noisy shuffling channel, which can be seen as the concatenation of a standard noisy channel (such as the BSC) and a shuffling channel, which breaks the data block into small pieces and shuffles…

Information Theory · Computer Science 2019-03-01 Ilan Shomorony , Reinhard Heckel

Eukaryotic cell development has been optimized by natural selection to obey maximal intracellular flux of messenger proteins. This, in turn, implies maximum Fisher information on angular position about a target nuclear pore complex (NPR).…

Subcellular Processes · Quantitative Biology 2014-05-01 B. R. Frieden , R. A. Gatenby
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