English

Towards Automatic Generation of Shareable Synthetic Clinical Notes Using Neural Language Models

Computation and Language 2019-05-23 v2

Abstract

Large-scale clinical data is invaluable to driving many computational scientific advances today. However, understandable concerns regarding patient privacy hinder the open dissemination of such data and give rise to suboptimal siloed research. De-identification methods attempt to address these concerns but were shown to be susceptible to adversarial attacks. In this work, we focus on the vast amounts of unstructured natural language data stored in clinical notes and propose to automatically generate synthetic clinical notes that are more amenable to sharing using generative models trained on real de-identified records. To evaluate the merit of such notes, we measure both their privacy preservation properties as well as utility in training clinical NLP models. Experiments using neural language models yield notes whose utility is close to that of the real ones in some clinical NLP tasks, yet leave ample room for future improvements.

Keywords

Cite

@article{arxiv.1905.07002,
  title  = {Towards Automatic Generation of Shareable Synthetic Clinical Notes Using Neural Language Models},
  author = {Oren Melamud and Chaitanya Shivade},
  journal= {arXiv preprint arXiv:1905.07002},
  year   = {2019}
}

Comments

Clinical NLP Workshop 2019

R2 v1 2026-06-23T09:09:39.124Z