Passage Times for Polymer Translocation Pulled through a Narrow Pore
Soft Condensed Matter
2008-02-14 v3 Statistical Mechanics
Biological Physics
Biomolecules
Abstract
We study the passage times of a translocating polymer of length in three dimensions, while it is pulled through a narrow pore with a constant force applied to one end of the polymer. At small to moderate forces, satisfying the condition , where is the Flory exponent for the polymer, we find that , the mean time the polymer takes to leave the pore, scales as independent of , in agreement with our earlier result for F=0. At strong forces, i.e., for , the behaviour of the passage time crosses over to . We show here that these behaviours stem from the polymer dynamics at the immediate vicinity of the pore -- in particular, the memory effects in the polymer chain tension imbalance across the pore.
Keywords
Cite
@article{arxiv.0706.3969,
title = {Passage Times for Polymer Translocation Pulled through a Narrow Pore},
author = {Debabrata Panja and Gerard T. Barkema},
journal= {arXiv preprint arXiv:0706.3969},
year = {2008}
}