English

Number of fixed points and disjoint cycles in monotone Boolean networks

Combinatorics 2017-11-08 v2 Discrete Mathematics Information Theory math.IT Molecular Networks

Abstract

Given a digraph GG, a lot of attention has been deserved on the maximum number ϕ(G)\phi(G) of fixed points in a Boolean network f:{0,1}n{0,1}nf:\{0,1\}^n\to\{0,1\}^n with GG as interaction graph. In particular, a central problem in network coding consists in studying the optimality of the classical upper bound ϕ(G)2τ\phi(G)\leq 2^{\tau}, where τ\tau is the minimum size of a feedback vertex set of GG. In this paper, we study the maximum number ϕm(G)\phi_m(G) of fixed points in a {\em monotone} Boolean network with interaction graph GG. We establish new upper and lower bounds on ϕm(G)\phi_m(G) that depends on the cycle structure of GG. In addition to τ\tau, the involved parameters are the maximum number ν\nu of vertex-disjoint cycles, and the maximum number ν\nu^{*} of vertex-disjoint cycles verifying some additional technical conditions. We improve the classical upper bound 2τ2^\tau by proving that ϕm(G)\phi_m(G) is at most the largest sub-lattice of {0,1}τ\{0,1\}^\tau without chain of size ν+1\nu+1, and without another forbidden-pattern of size 2ν2\nu^{*}. Then, we prove two optimal lower bounds: ϕm(G)ν+1\phi_m(G)\geq \nu+1 and ϕm(G)2ν\phi_m(G)\geq 2^{\nu^{*}}. As a consequence, we get the following characterization: ϕm(G)=2τ\phi_m(G)=2^\tau if and only if ν=τ\nu^{*}=\tau. As another consequence, we get that if cc is the maximum length of a chordless cycle of GG then 2ν/3cϕm(G)2cν2^{\nu/3^c}\leq\phi_m(G)\leq 2^{c\nu}. Finally, with the technics introduced, we establish an upper bound on the number of fixed points of any Boolean network according to its signed interaction graph.

Keywords

Cite

@article{arxiv.1602.03109,
  title  = {Number of fixed points and disjoint cycles in monotone Boolean networks},
  author = {Julio Aracena and Adrien Richard and Lilian Salinas},
  journal= {arXiv preprint arXiv:1602.03109},
  year   = {2017}
}

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24 pages