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Given a graph $G$, viewed as a loop-less symmetric digraph, we study the maximum number of fixed points in a conjunctive boolean network with $G$ as interaction graph. We prove that if $G$ has no induced $C_4$, then this quantity equals…

Combinatorics · Mathematics 2017-11-08 Julio Aracena , Adrien Richard , Lilian Salinas

In this paper, we are interested in the number of fixed points of functions $f:A^n\to A^n$ over a finite alphabet $A$ defined on a given signed digraph $D$. We first use techniques from network coding to derive some lower bounds on the…

Discrete Mathematics · Computer Science 2014-09-23 Maximilien Gadouleau , Adrien Richard , Søren Riis

We are interested in fixed points in Boolean networks, {\em i.e.} functions $f$ from $\{0,1\}^n$ to itself. We define the subnetworks of $f$ as the restrictions of $f$ to the subcubes of $\{0,1\}^n$, and we characterizes a class…

Discrete Mathematics · Computer Science 2014-12-05 Adrien Richard

Let $G$ be a graph without isolated vertices and let $\alpha(G)$ be its stability number and $\tau(G)$ its covering number. The {\it $\alpha_{v}$-cover} number of a graph, denoted by $\alpha_{v}(G)$, is the maximum natural number $m$ such…

Combinatorics · Mathematics 2013-09-02 Isidoro Gitler , Carlos E. Valencia

We are interested in the relationships between the number fixed points in a Boolean network $f:\{0,1\}^n\to\{0,1\}^n$ and its interaction graph, which is the arc-signed digraph $G$ on $\{1,\dots,n\}$ that describes the positive and negative…

Discrete Mathematics · Computer Science 2017-11-17 Adrien Richard

We consider the Cartesian product X of n finite intervals of integers and a map F from X to itself. As main result, we establish an upper bound on the number of fixed points for F which only depends on X and on the topology of the positive…

Discrete Mathematics · Computer Science 2008-12-01 Adrien Richard

Linear network coding transmits data through networks by letting the intermediate nodes combine the messages they receive and forward the combinations towards their destinations. The solvability problem asks whether the demands of all the…

Information Theory · Computer Science 2014-12-18 Maximilien Gadouleau , Adrien Richard , Eric Fanchon

The problem of finding a maximum $2$-matching without short cycles has received significant attention due to its relevance to the Hamilton cycle problem. This problem is generalized to finding a maximum $t$-matching which excludes specified…

Combinatorics · Mathematics 2023-11-01 Yuni Iwamasa , Yusuke Kobayashi , Kenjiro Takazawa

In the modeling of biological systems by Boolean networks a key problem is finding the set of fixed points of a given network. Some constructed algorithms consider certain structural properties of the interaction graph like those proposed…

Discrete Mathematics · Computer Science 2020-04-06 Julio Aracena , Luis Cabreras-Crot , Lilian Salinas

We improve the best known lower bounds on the exponential behavior of the maximum of the number of connected sets, $N(G)$, and dominating connected sets, $N_{dom}(G)$, for regular graphs. These lower bounds are improved by constructing a…

Combinatorics · Mathematics 2024-09-27 Stijn Cambie , Jan Goedgebeur , Jorik Jooken

The size of a largest independent set of vertices in a given graph $G$ is denoted by $\alpha(G)$ and is called its independence number (or stability number). Given a graph $G$ and an integer $K,$ it is NP-complete to decide whether…

Combinatorics · Mathematics 2017-09-11 Ingo Schiermeyer

Given a graph $G$, the strong clique number of $G$, denoted $\omega_S(G)$, is the maximum size of a set $S$ of edges such that every pair of edges in $S$ has distance at most $2$ in the line graph of $G$. As a relaxation of the renowned…

Combinatorics · Mathematics 2020-03-24 Eun-Kyung Cho , Ilkyoo Choi , Ringi Kim , Boram Park

Let $G$ be a simple graph with $2n$ vertices and a perfect matching. We denote by $f(G)$ and $F(G)$ the minimum and maximum forcing number of $G$, respectively. Hetyei obtained that the maximum number of edges of graphs $G$ with a unique…

Combinatorics · Mathematics 2022-11-23 Qianqian Liu , Heping Zhang

We consider the problem of determining the maximum order of an induced vertex-disjoint union of cliques in a graph. More specifically, given some family of graphs $\mathcal{G}$ of equal order, we are interested in the parameter…

Combinatorics · Mathematics 2019-12-11 Nika Salia , Christoph Spiegel , Casey Tompkins , Oscar Zamora

Automata networks, and in particular Boolean networks, are used to model diverse networks of interacting entities. The interaction graph of an automata network is its most important parameter, as it represents the overall architecture of…

Formal Languages and Automata Theory · Computer Science 2023-09-21 Maximilien Gadouleau

The relationship between the properties of a dynamical system and the structure of its defining equations has long been studied in many contexts. Here we study this problem for the class of conjunctive (resp. disjunctive) Boolean networks,…

Combinatorics · Mathematics 2008-05-13 Abdul Salam Jarrah , Reinhard Laubenbacher , Alan Veliz-Cuba

For a finite graph $G$, we study the maximum $2$-edge colorable subgraph problem and a related ratio $\frac{\mu(G)}{\nu(G)}$, where $\nu(G)$ is the matching number of $G$, and $\mu(G)$ is the size of the largest matching in any pair…

Combinatorics · Mathematics 2023-06-07 Huizheng , Guo , Kieran Kaempen , Zhengda Mo , Sam Qunell , Joe Rogge , Chao Song , Anush Tserunyan , Jenna Zomback

Upper bounds on the maximum number of minimal codewords in a binary code follow from the theory of matroids. Random coding provide lower bounds. In this paper we compare these bounds with analogous bounds for the cycle code of graphs. This…

Information Theory · Computer Science 2012-04-05 Adel Alahmadi , R. E. L. Aldred , Romar dela Cruz , Patrick Solé , Carsten Thomassen

We introduce a new graph parameter called linear upper maximum induced matching width \textsc{lu-mim width}, denoted for a graph $G$ by $lu(G)$. We prove that the smallest size of the \textsc{obdd} for $\varphi$, the monotone 2-\textsc{cnf}…

Combinatorics · Mathematics 2021-07-20 Igor Razgon

The main topic considered is maximizing the number of cycles in a graph with given number of edges. In 2009, Kir\'aly conjectured that there is constant $c$ such that any graph with $m$ edges has at most $(1.4)^m$ cycles. In this paper, it…

Combinatorics · Mathematics 2017-02-13 Andrii Arman , Sergei Tsaturian
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