Quantitative Methods · Quantitative Biology
Comparative analysis of protein structure using multiscale additive functionals
Marconi Soares Barbosa, Rinaldo Wander Montalvao, Tom Blundell, Luciano da Fontoura Costa
2007-05-23
Biological Physics · Physics
Geometry of compact tubes and protein structures
J. R. Banavar, A. Flammini, D. Marenduzzo, A. Maritan +1
2007-05-23
Biomolecules · Quantitative Biology
Fatgraph Models of Proteins
R. C. Penner, Michael Knudsen, Carsten Wiuf, Joergen Ellegaard Andersen
2009-05-30
Computational Engineering, Finance, and Science · Computer Science
Protein Folding in the Hexagonal Prism Lattice with Diagonals
Dipan Lal Shaw, M. Sohel Rahman, A. S. M. Sohidull Islam, Shuvasish Karmaker
2014-07-18
Condensed Matter · Physics
A hierarchical scheme for cooperativity and folding in proteins
Alex Hansen, Mogens H. Jensen, Kim Sneppen, Giovanni Zocchi
2015-06-25
Statistical Mechanics · Physics
The totally asymmetric exclusion process with extended objects, a model for protein synthesis
Leah B. Shaw, R. K. P. Zia, Kelvin H. Lee
2009-11-10
Biomolecules · Quantitative Biology
Geometry of proteins: hydrogen bonding, sterics and marginally compact tubes
Jayanth R. Banavar, Marek Cieplak, Alessandro Flammini, Trinh X. Hoang +7
2009-11-11
Computational Engineering, Finance, and Science · Computer Science
Equivalence Classes of Optimal Structures in HP Protein Models Including Side Chains
Martin Mann, Rolf Backofen, Sebastian Will
2009-10-21
Computational Engineering, Finance, and Science · Computer Science
Design and Optimization of Conforming Lattice Structures
Jun Wu, Weiming Wang, Xifeng Gao
2019-09-06
Statistical Mechanics · Physics
Steric constraints in model proteins
Cristian Micheletti, Jayanth R. Banavar, Amos Maritan, Flavio Seno
2009-10-30
Machine Learning · Computer Science
ProtAlign: Contrastive learning paradigm for Sequence and structure alignment
Aditya Ranganath, Hasin Us Sami, Kowshik Thopalli, Bhavya Kailkhura +1
2026-03-10