Extracting Biological Pathway Models From NLP Event Representations

Michael Spranger; Sucheendra K. Palaniappan; Samik Ghosh

Extracting Biological Pathway Models From NLP Event Representations

Computation and Language 2016-08-15 v1 Molecular Networks

Authors: Michael Spranger , Sucheendra K. Palaniappan , Samik Ghosh

Abstract

This paper describes an an open-source software system for the automatic conversion of NLP event representations to system biology structured data interchange formats such as SBML and BioPAX. It is part of a larger effort to make results of the NLP community available for system biology pathway modelers.

Extracting Biological Pathway Models From NLP Event Representations

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