Artificial Intelligence · Computer Science
Multimodal Large Language Models for Bioimage Analysis
Shanghang Zhang, Gaole Dai, Tiejun Huang, Jianxu Chen
2025-10-02
Computational Engineering, Finance, and Science · Computer Science
Biological Computing Fundamentals and Futures
Balaji Akula, James Cusick
2009-11-10
Artificial Intelligence · Computer Science
Understanding Biology in the Age of Artificial Intelligence
Elsa Lawrence, Adham El-Shazly, Srijit Seal, Chaitanya K Joshi +5
2024-03-08
Computation and Language · Computer Science
Large Language Models, scientific knowledge and factuality: A framework to streamline human expert evaluation
Magdalena Wysocka, Oskar Wysocki, Maxime Delmas, Vincent Mutel +1
2024-10-21
Biomolecules · Quantitative Biology
SBMLtoODEjax: Efficient Simulation and Optimization of Biological Network Models in JAX
Mayalen Etcheverry, Michael Levin, Clément Moulin-Frier, Pierre-Yves Oudeyer
2023-10-31
Biomolecules · Quantitative Biology
Biology-Instructions: A Dataset and Benchmark for Multi-Omics Sequence Understanding Capability of Large Language Models
Haonan He, Yuchen Ren, Yining Tang, Ziyang Xu +11
2025-09-24
Molecular Networks · Quantitative Biology
SBML Qualitative Models: a model representation format and infrastructure to foster interactions between qualitative modelling formalisms and tools
Claudine Chaouiya, Duncan Berenguier, Sarah M Keating, Aurelien Naldi +20
2013-09-10
Computational Engineering, Finance, and Science · Computer Science
Bigraphical models for protein and membrane interactions
Giorgio Bacci, Davide Grohmann, Marino Miculan
2009-11-25
Computation and Language · Computer Science
GAPMAP: Mapping Scientific Knowledge Gaps in Biomedical Literature Using Large Language Models
Nourah M Salem, Elizabeth White, Michael Bada, Lawrence Hunter
2025-10-30
Machine Learning · Computer Science
The limits of bio-molecular modeling with large language models : a cross-scale evaluation
Yaxin Xu, Yue Zhou, Tianyu Zhao, Fengwei An +1
2026-04-07