English

Driven translocation of a flexible polymer through an interacting conical pore

Soft Condensed Matter 2021-02-17 v1

Abstract

We study the driven translocation of a flexible polymer through an interacting conical pore using Langevin dynamics simulations. We find that, for a fixed value of externally applied force and pore polymer interaction strength, the mean residence time of monomers inside the pore shows non-monotonic variations with pore apex angle α\alpha. We explain this behavior using a free energy argument by explicitly accounting for pore-polymer interactions and external drive. Our theoretical observations are corroborated by the simulation results of the mean translocation times as the pore-polymer interactions and external driving force are varied.

Keywords

Cite

@article{arxiv.2102.08067,
  title  = {Driven translocation of a flexible polymer through an interacting conical pore},
  author = {Rajneesh Kumar and Abhishek Chaudhuri and Rajeev Kapri},
  journal= {arXiv preprint arXiv:2102.08067},
  year   = {2021}
}

Comments

6 figures

R2 v1 2026-06-23T23:12:17.658Z