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AskBeacon -- Performing genomic data exchange and analytics with natural language

Artificial Intelligence 2024-10-24 v2 Computers and Society Genomics
Authors: Anuradha Wickramarachchi , Shakila Tonni , Sonali Majumdar , Sarvnaz Karimi , Sulev Kõks , Brendan Hosking , Jordi Rambla , Natalie A. Twine , Yatish Jain , Denis C. Bauer
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Abstract

Enabling clinicians and researchers to directly interact with global genomic data resources by removing technological barriers is vital for medical genomics. AskBeacon enables Large Language Models to be applied to securely shared cohorts via the GA4GH Beacon protocol. By simply "asking" Beacon, actionable insights can be gained, analyzed and made publication-ready.

Cite

@article{arxiv.2410.16700,
  title  = {AskBeacon -- Performing genomic data exchange and analytics with natural language},
  author = {Anuradha Wickramarachchi and Shakila Tonni and Sonali Majumdar and Sarvnaz Karimi and Sulev Kõks and Brendan Hosking and Jordi Rambla and Natalie A. Twine and Yatish Jain and Denis C. Bauer},
  journal= {arXiv preprint arXiv:2410.16700},
  year   = {2024}
}

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