English

Translocation frequency of double-stranded DNA through a solid-state nanopore

Biological Physics 2016-03-23 v2 Soft Condensed Matter Biomolecules

Abstract

Solid-state nanopores are single molecule sensors that measure changes in ionic current as charged polymers such as DNA pass through. Here, we present comprehensive experiments on the length, voltage and salt dependence of the frequency of double-stranded DNA translocations through conical quartz nanopores with mean opening diameter 15 nm. We observe an entropic barrier limited, length dependent translocation frequency at 4M LiCl salt concentration and a drift-dominated, length independent translocation frequency at 1M KCl salt concentration. These observations are described by a unifying convection-diffusion equation which includes the contribution of an entropic barrier for polymer entry.

Keywords

Cite

@article{arxiv.1508.04396,
  title  = {Translocation frequency of double-stranded DNA through a solid-state nanopore},
  author = {Nicholas A. W. Bell and Murugappan Muthukumar and Ulrich F. Keyser},
  journal= {arXiv preprint arXiv:1508.04396},
  year   = {2016}
}

Comments

12 pages, 15 figures

R2 v1 2026-06-22T10:36:16.263Z