Genomics · Quantitative Biology
A review of computational tools for generating metagenome-assembled genomes from metagenomic sequencing data
Chao Yang, Debajyoti Chowdhury, Zhenmiao Zhang, William K. Cheung +3
2021-09-03
Applications · Statistics
Statistical computation methods for microbiome compositional data network inference
Liang Chen, Qiuyan He, Hui Wan, Shun He +1
2021-09-07
Quantitative Methods · Quantitative Biology
Metagenomics for clinical diagnostics: technologies and informatics
Caitlin Loeffler, Keylie M. Gibson, Lana Martin, Liz Chang +8
2020-08-11
Quantitative Methods · Quantitative Biology
Using genome-wide expression compendia to study microorganisms
Alexandra J. Lee, Taylor Reiter, Georgia Doing, Julia Oh +2
2022-03-29
Populations and Evolution · Quantitative Biology
An Interdisciplinary Perspective of the Built-Environment Microbiome
John S. McAlister, Michael J. Blum, Yana Bromberg, Nina H. Fefferman +7
2025-07-04
Cell Behavior · Quantitative Biology
Methods and measures for investigating microscale motility
Karen Grace Bondoc-Naumovitz, Hannah Laeverenz-Schlogelhofer, Rebecca N. Poon, Alexander K. Boggon +3
2023-09-01
Machine Learning · Statistics
The Phylogenetic LASSO and the Microbiome
Stephen T Rush, Christine H Lee, Washington Mio, Peter T Kim
2016-08-01
Computer Vision and Pattern Recognition · Computer Science
A Comprehensive Survey with Quantitative Comparison of Image Analysis Methods for Microorganism Biovolume Measurements
Jiawei Zhang, Chen Li, Md Mamunur Rahaman, Yudong Yao +5
2022-05-03
Image and Video Processing · Electrical Eng. & Systems
A Comprehensive Review of Image Analysis Methods for Microorganism Counting: From Classical Image Processing to Deep Learning Approaches
Jiawei Zhang, Chen Li, Md Mamunur Rahaman, Yudong Yao +5
2021-09-30
Quantitative Methods · Quantitative Biology
Statistical Methods and Workflow for Analyzing Human Metabolomics Data
Joseph Antonelli, Brian Claggett, Mir Henglin, Jeramie D. Watrous +8
2018-02-21