English

Nonlinear drift-diffusion model of gating in the fast Cl channel

Mesoscale and Nanoscale Physics 2015-06-22 v1 Soft Condensed Matter Biological Physics

Abstract

The dynamics of the open or closed state region of an ion channel may be described by a probability density p(x,t)p(x,t) which satisfies a Fokker-Planck equation. The closed state dwell-time distribution fc(t)f_c(t) derived from the Fokker-Planck equation with a nonlinear diffusion coefficient D(x)exp(γx)D(x) \propto \exp(-\gamma x), γ>0\gamma > 0 and a linear ramp potential Uc(x)U_c(x), is in good agreement with experimental data and it may be shown analytically that if γ\gamma is sufficiently large, fc(t)t2νf_c(t) \propto t^{-2 - \nu} for intermediate times, where ν=Uc/γ0.3\nu = U_c^{\prime}/\gamma \approx -0.3 for a fast Cl channel. The solution of a master equation which approximates the Fokker-Planck equation exhibits an oscillation superimposed on the power law trend and can account for an empirical rate-amplitude correlation that applies to several ion channels.

Keywords

Cite

@article{arxiv.1407.2595,
  title  = {Nonlinear drift-diffusion model of gating in the fast Cl channel},
  author = {Samuel R. Vaccaro},
  journal= {arXiv preprint arXiv:1407.2595},
  year   = {2015}
}
R2 v1 2026-06-22T04:59:55.700Z