English

New DNA Cyclic Codes over Rings

Information Theory 2015-05-26 v1 math.IT

Abstract

This paper is dealing with DNA cyclic codes which play an important role in DNA computing and have attracted a particular attention in the literature. Firstly, we introduce a new family of DNA cyclic codes over the ring R=F2[u]/(u6)R=\mathbb{F}_2[u]/(u^6). Such codes have theoretical advantages as well as several applications in DNA computing. A direct link between the elements of such a ring and the 6464 codons used in the amino acids of the living organisms is established. Such a correspondence allows us to extend the notion of the edit distance to the ring RR which is useful for the correction of the insertion, deletion and substitution errors. Next, we define the Lee weight, the Gray map over the ring RR as well as the binary image of the cyclic DNA codes allowing the transfer of studying DNA codes into studying binary codes. Secondly, we introduce another new family of DNA skew cyclic codes constructed over the ring R~=F2+vF2={0,1,v,v+1}\tilde {R}=\mathbb{F}_2+v\mathbb{F}_2=\{0,1,v,v+1\} where v2=vv^2=v and study their property of being reverse-complement. We show that the obtained code is derived from the cyclic reverse-complement code over the ring R~\tilde {R}. We shall provide the binary images and present some explicit examples of such codes.

Keywords

Cite

@article{arxiv.1505.06263,
  title  = {New DNA Cyclic Codes over Rings},
  author = {Nabil Bennenni and Kenza Guenda and Sihem Mesnager},
  journal= {arXiv preprint arXiv:1505.06263},
  year   = {2015}
}
R2 v1 2026-06-22T09:39:57.609Z