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Many problems in computational geometry are not stated in graph-theoretic terms, but can be solved efficiently by constructing an auxiliary graph and performing a graph-theoretic algorithm on it. Often, the efficiency of the algorithm…

Computational Geometry · Computer Science 2009-08-28 David Eppstein

We apply numerical optimization and linear algebra algorithms for classical computers to the problem of automatically synthesizing algorithms for quantum computers. Using our framework, we apply several common techniques from these…

Numerical Analysis · Mathematics 2025-09-16 Yuxin Huang , Benjamin E. Grossman-Ponemon , David A. B. Hyde

We show that one can formulate an algebra with lattice ordering so as to contain one quantum and five classical operations as opposed to the standard formulation of the Hilbert space subspace algebra. The standard orthomodular lattice is…

Quantum Physics · Physics 2007-05-23 Norman D. Megill , Mladen Pavicic

Graph transformation formalisms have proven to be suitable tools for the modelling of chemical reactions. They are well established in theoretical studies and increasingly also in practical applications in chemistry. The latter is made…

Discrete Mathematics · Computer Science 2022-08-29 Jakob L. Andersen , Rolf Fagerberg , Juri Kolčák , Christophe V. F. P. Laurent , Daniel Merkle , Nikolai Nøjgaard

Graph coloring is a computationally difficult problem, and currently the best known classical algorithm for $k$-coloring of graphs on $n$ vertices has runtimes $\Omega(2^n)$ for $k\ge 5$. The list coloring problem asks the following more…

Quantum Physics · Physics 2022-03-04 Sayan Mukherjee

An algorithm observes the trajectories of random walks over an unknown graph $G$, starting from the same vertex $x$, as well as the degrees along the trajectories. For all finite connected graphs, one can estimate the number of edges $m$ up…

Statistics Theory · Mathematics 2018-08-20 Anna Ben-Hamou , Roberto I. Oliveira , Yuval Peres

Given a persistence diagram with $n$ points, we give an algorithm that produces a sequence of $n$ persistence diagrams converging in bottleneck distance to the input diagram, the $i$th of which has $i$ distinct (weighted) points and is a…

Computational Geometry · Computer Science 2020-12-04 Donald R. Sheehy , Siddharth Sheth

Do algorithms for drawing graphs pass the Turing Test? That is, are their outputs indistinguishable from graphs drawn by humans? We address this question through a human-centred experiment, focusing on `small' graphs, of a size for which it…

Social and Information Networks · Computer Science 2021-05-11 Helen C. Purchase , Daniel Archambault , Stephen Kobourov , Martin Nöllenburg , Sergey Pupyrev , Hsiang-Yun Wu

A novel framework has recently been proposed for designing the molecular structure of chemical compounds with a desired chemical property using both artificial neural networks and mixed integer linear programming. In the framework, a…

Machine Learning · Computer Science 2021-08-24 Naveed Ahmed Azam , Jianshen Zhu , Kazuya Haraguchi , Liang Zhao , Hiroshi Nagamochi , Tatsuya Akutsu

We present new algorithms and fast implementations to find efficient approximations for modelling stochastic processes. For many numerical computations it is essential to develop finite approximations for stochastic processes. While the…

Optimization and Control · Mathematics 2020-12-03 Kipngeno Benard Kirui , Georg Ch. Pflug , Alois Pichler

A novel code construction algorithm is presented to find all the possible code families for code reconfiguration in an OCDMA system. The algorithm is developed through searching all the complete subgraphs of a constructed graph. The…

Information Theory · Computer Science 2007-07-13 Xiang Lu , Jiajia Chen , Sailing He

We consider the problem of sparse atomic optimization, where the notion of "sparsity" is generalized to meaning some linear combination of few atoms. The definition of atomic set is very broad; popular examples include the standard basis,…

Optimization and Control · Mathematics 2019-12-30 Thomas Zhang

An algorithm, based on numerical description of the terms of many-body perturbation theory (Goldstone diagrams), is presented. The algorithm allows the use of the same piece of computer code to evaluate any particular diagram in any…

Atomic Physics · Physics 2015-05-13 V. A. Dzuba

We study greedy-type algorithms such that at a greedy step we pick several dictionary elements contrary to a single dictionary element in standard greedy-type algorithms. We call such greedy algorithms {\it super greedy algorithms}. The…

Numerical Analysis · Mathematics 2010-10-27 Entao Liu , Vladimir N. Temlyakov

Characterizing graphs by their spectra is a fundamental and challenging problem in spectral graph theory, which has received considerable attention in recent years. A major unsolved conjecture in this area is Haemers' conjecture which…

Combinatorics · Mathematics 2024-10-04 Wei Wang , Wei Wang

Order diagrams are an important tool to visualize the complex structure of ordered sets. Favorable drawings of order diagrams, i.e., easily readable for humans, are hard to come by, even for small ordered sets. Many attempts were made to…

Computational Geometry · Computer Science 2023-12-29 Dominik Dürrschnabel , Tom Hanika , Gerd Stumme

We consider several subgroup-related algorithmic questions in groups, modeled after the classic computational lattice problems, and study their computational complexity. We find polynomial time solutions to problems like finding a subgroup…

Group Theory · Mathematics 2015-08-12 Alexei Myasnikov , Andrey Nikolaev , Alexander Ushakov

We report on a lattice based algorithm, completely vectorized for molecular dynamics simulations. Its algorithmic complexity is of the order $O(N)$, where $N$ is the number of particles. The algorithm works very effectively when the…

comp-gas · Physics 2019-06-05 V. Buchholtz , T. Pöschel

Building on existing algorithms and results, we offer new insights and algorithms for various problems related to detecting maximal and maximum bicliques. Most of these results focus on graphs with small maximum degree, providing improved…

Data Structures and Algorithms · Computer Science 2024-12-17 George Manoussakis

We describe a new random greedy algorithm for generating regular graphs of high girth: Let $k\geq 3$ and $c \in (0,1)$ be fixed. Let $n \in \mathbb{N}$ be even and set $g = c \log_{k-1} (n)$. Begin with a Hamilton cycle $G$ on $n$ vertices.…

Combinatorics · Mathematics 2020-06-30 Nati Linial , Michael Simkin