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At any moment in time, evolution is faced with a formidable challenge: refining the already highly optimised design of biological species, a feat accomplished through all preceding generations. In such a scenario, the impact of random…

Populations and Evolution · Quantitative Biology 2024-02-20 Alessandro Fontana , Marios Kyriazis

Computer experiments that mirror the evolutionary dynamics of sexual and asexual organisms as they occur in nature, tested features proposed to explain the evolution of sexual recombination. Results show that this evolution is better…

Populations and Evolution · Quantitative Biology 2018-04-18 Klaus Jaffe

We present simulations of evacuation processes using a recently introduced cellular automaton model for pedestrian dynamics. This model applies a bionics approach to describe the interaction between the pedestrians using ideas from…

Statistical Mechanics · Physics 2015-06-24 Ansgar Kirchner , Andreas Schadschneider

A branching process in varying environment with generation-dependent immigration is a modification of the standard branching process in which immigration is allowed and the reproduction and immigration laws may vary over the generations.…

Probability · Mathematics 2024-01-31 Miguel González , Goetz Kersting , Carmen Minuesa , Inés del Puerto

Climate-mediated changes in the spatiotemporal distribution of thermal stress can destabilize animal populations and promote extinction risk. Using quantile, spectral, and wavelet analyses of temperature projections from the latest…

Populations and Evolution · Quantitative Biology 2022-12-22 Kate Duffy , Tarik C. Gouhier , Auroop R. Ganguly

This review is an introduction to theoretical models and mathematical calculations for biological evolution, aimed at physicists. The methods in the field are naturally very similar to those used in statistical physics, although the…

Statistical Mechanics · Physics 2015-06-24 Barbara Drossel

Development combines three basic processes asymmetric --- cell division, signaling and gene regulation --- in a multitude of ways to create an overwhelming diversity of multicellular life-forms. Here, we attempt to chart this diversity…

Molecular Networks · Quantitative Biology 2020-01-01 Somya Mani , Tsvi Tlusty

Sex is considered as an evolutionary paradox, since its evolutionary advantage does not necessarily overcome the two fold cost of sharing half of one's offspring's genome with another member of the population. Here we demonstrate that…

Populations and Evolution · Quantitative Biology 2015-05-13 Alexander Feigel , Avraham Englander , Assaf Engel

We study the dynamics of a second-order difference equation that is derived from a planar Ricker model of two-stage (e.g. adult, juvenile) biological populations. We obtain sufficient conditions for global convergence to zero in the…

Dynamical Systems · Mathematics 2017-02-14 N. Lazaryan , H. Sedaghat

A model of an organism as an autonomous intelligent system has been proposed. This model was used to analyze learning of an organism in various environmental conditions. Processes of learning were divided into two types: strong and weak…

Artificial Intelligence · Computer Science 2007-05-23 Alexey V. Melkikh

We study a birth and death model for the adapatation of a sexual population to an environment. The population is structured by a phenotypical trait, and, possibly, an age variable. Recombination is modeled by Fisher's infinitesimal…

Populations and Evolution · Quantitative Biology 2017-03-28 Thibault Bourgeron , Vincent Calvez , Jimmy Garnier , Thomas Lepoutre

Atomic-level simulations are widely used to study biomolecules and their dynamics. A common goal in such studies is to compare simulations of a molecular system under several conditions -- for example, with various mutations or bound…

Biomolecules · Quantitative Biology 2025-01-07 Martin Vögele , Neil J. Thomson , Sang T. Truong , Jasper McAvity , Ulrich Zachariae , Ron O. Dror

The paper discusses a connection between asymmetric reproduction -- that is reproduction in a parent-child relationship where the parent does not mutate during reproduction --, the fact that all non-viral lifeforms bear genes of their…

Populations and Evolution · Quantitative Biology 2015-08-11 Norbert Michael Mayer

A two-type two-sex branching process is introduced with the aim of describing the interaction of predator and prey populations with sexual reproduction and promiscuous mating. In each generation and in each species the total number of…

Populations and Evolution · Quantitative Biology 2021-01-29 Cristina Gutierrez , Carmen Minuesa

Cells generally change their internal state to adapt to an environmental change, and accordingly evolve in response to the new conditions. This process involves phenotypic changes that occur over several different time scales, ranging from…

Populations and Evolution · Quantitative Biology 2015-02-03 Chikara Furusawa , Kunihiko Kaneko

Biological organisms have to cope with stochastic variations in both the external environment and the internal population dynamics. Theoretical studies and laboratory experiments suggest that population diversification could be an effective…

Populations and Evolution · Quantitative Biology 2017-09-13 BingKan Xue , Stanislas Leibler

This paper studies the mutation-selection balance in three simplified replication models. The first model considers a population of organisms replicating via the production of asexual spores. The second model considers a sexually…

Populations and Evolution · Quantitative Biology 2009-11-13 Emmanuel Tannenbaum

As a contribution to the prediction of the evolutionary behavior of biocomposites in service conditions, this study focused on the simulation of the hydrothermal aging of short natural fiber reinforced composites made by extrusion/injection…

Applied Physics · Physics 2018-08-23 Arnaud Regazzi , Romain Léger , Stéphane Corn , Patrick Ienny

We study the evolutionary dynamics of a phenotypically structured population in a changing environment , where the environmental conditions vary with a linear trend but in an oscillatory manner. Such phenomena can be described by parabolic…

Analysis of PDEs · Mathematics 2021-05-04 Susely Figueroa Iglesias , Sepideh Mirrahimi

We introduce a multi-locus genetically acquired phenotype, submitted to mutations and with selective value, in an age-structured model for biological aging. This phenotype describes a single-trait effect of the environment on an individual,…

Statistical Mechanics · Physics 2009-10-31 J. S. Sa' Martins , S. Moss de Oliveira , G. A. de Medeiros