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The extinction transition on a one dimensional heterogeneous substrate with diffusive correlations is studied. Diffusively correlated heterogeneity is shown to affect the location of the transition point, as the reactants adapt to the…

Statistical Mechanics · Physics 2008-08-06 Galit Evron , David A. Kessler , Nadav M. Shnerb

How multicellular life forms evolved out from unicellular ones constitutes a major problem in our understanding of the evolution of our biosphere. A recent set of experiments involving yeast cell populations has shown that selection for…

Populations and Evolution · Quantitative Biology 2015-11-10 Salva Duran-Nebreda , Ricard V. Solé

Evolutionary and ecosystem dynamics are often treated as different processes --operating at separate timescales-- even if evidence reveals that rapid evolutionary changes can feed back into ecological interactions. A recent long-term field…

Populations and Evolution · Quantitative Biology 2018-10-04 Paula Villa Martín , Jorge Hidalgo , Rafael Rubio de Casas , Miguel A. Muñoz

How adaptive evolution to one environmental stress improves or suppresses adaptation to another is an important problem in evolutionary biology. For instance, in microbiology, the evolution of bacteria to be resistant to different…

Populations and Evolution · Quantitative Biology 2023-02-23 Takuya U. Sato , Chikara Furusawa , Kunihiko Kaneko

The wings of Lepidoptera contain a matrix of living cells whose function requires appropriate temperatures. However, given their small thermal capacity, wings can overheat rapidly in the sun. Here we analyze butterfly wings across a wide…

We study the active to absorbing phase transition (AAPT) in a simple two-component model system for a species and its mutant. We uncover the nontrivial critical scaling behavior and weak dynamic scaling near the AAPT that shows the…

Statistical Mechanics · Physics 2015-10-07 Niladri Sarkar

Time series of cell size evolution in unicellular marine algae (division Haptophyta; Coccolithus lineage), covering 57 million years, are studied by a system of linear stochastic differential equations of hierarchical structure. The data…

Applications · Statistics 2013-01-09 Trond Reitan , Tore Schweder , Jorijntje Henderiks

Within the framework of population genetics we consider the evolution of an asexual haploid population under the effect of a rapidly varying natural selection (microevolution). We focus on the case in which the environment exerting…

Populations and Evolution · Quantitative Biology 2015-06-22 Stefano Bo , Andrea Mazzolini , Antonio Celani

The emergence of multicellularity and developmental programs are among the major problems of evolutionary biology. Traditionally, research in this area has been based on the combination of data analysis and experimental work on one hand and…

Populations and Evolution · Quantitative Biology 2014-03-14 Ricard V. Solé , Salva Duran-Nebreda

We present an individual based model of evolutionary ecology. The reproduction rate of individuals characterized by their genome depends on the composition of the population in genotype space. Ecological features such as the taxonomy and…

Statistical Mechanics · Physics 2016-08-31 Matt Hall , Kim Christensen , Simone A. di Collobiano , Henrik Jeldtoft Jensen

Simulation results are presented to demonstrate electron temperature and electrical potential development in dilute and cold plasma development. The simulation method is a hybrid method which adopted fluid model for electrons due to their…

Plasma Physics · Physics 2024-09-13 Shiying Cai , Chunpei Cai , Zhen Zhang

An agent-based computer simulation of death by inheritable mutations in a changing environment shows a maximal population, or avoids extinction, at so intermediate mutation rate of the individuals. Thus death seems needed to al for…

Populations and Evolution · Quantitative Biology 2008-09-02 J. S. Sa Martins , D. Stauffer , P. M. C. de Oliveira , S. Moss de Oliveira

A fundamental issue discussed in evolutionary biology is the transition from unicellular to multicellular organisms. Here we develop non-robust models provided in [1] and attempt to get robust models investigated how differentiation of…

Populations and Evolution · Quantitative Biology 2015-12-15 Denis Tverskoy

We use interacting particle systems to investigate survival and extinction of a species with colonies located on each site of $\mathbb {Z}^d$. In each of the four models studied, an individual in a local population can reproduce, die or…

Probability · Mathematics 2012-05-15 Davide Borrello

In this work we study the permanence and extinction of a regime-switching predator-prey model with Beddington-DeAngelis functional response. The switching process is used to describe the random changing of corresponding parameters such as…

Probability · Mathematics 2020-01-14 Jianhai Bao , Jinghai Shao

We describe a percolation-type approach to modeling of the processes of aging and certain other properties of tissues analyzed as systems consisting of interacting cells. Tissues are considered as structures made of regular healthy,…

Statistical Mechanics · Physics 2016-01-28 Vladimir Privman , Vyacheslav Gorshkov , Sergiy Libert

Mass extinction is a phenomenon in the history of life on Earth when a considerable number of species go extinct over a relatively short period of time. The magnitude of extinction varies between the events, the most well known are the…

Adaptation and Self-Organizing Systems · Physics 2022-08-29 Amer Alsulami , Sergei Petrovskii

An organism that is newly introduced into an existing population has a survival probability that is dependent on both the population density of its environment and the competition it experiences with the members of that population.…

Populations and Evolution · Quantitative Biology 2024-12-17 Jason M. Gray , Rowan J. Barker-Clarke , Jacob G. Scott , Michael Hinczewski

Phylogenetic trees are widely used to understand the evolutionary history of organisms. Tree shapes provide information about macroevolutionary processes. However, macroevolutionary models are unreliable for inferring the true processes…

Populations and Evolution · Quantitative Biology 2021-10-11 Albert Ch. Soewongsono , Barbara R. Holland , Małgorzata M. O'Reilly

We consider a stochastic model for an evolving population. We show that in the presence of genotype extinctions the population dies out for a low mutation probability but may survive for a high mutation probability. This turns upside down…

Populations and Evolution · Quantitative Biology 2014-10-24 Rinaldo B. Schinazi