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Repetitive elements are important in genomic structures, functions and regulations, yet effective methods in precisely identifying repetitive elements in DNA sequences are not fully accessible, and the relationship between repetitive…

Genomics · Quantitative Biology 2016-08-03 Changchuan Yin

Monotone chain polar codes generalize classical polar codes to multivariate settings, offering a flexible approach for achieving the entire admissible rate region in the distributed lossless coding problem. However, this flexibility also…

Information Theory · Computer Science 2025-09-04 Zichang Ren , Chunhang Zheng , Dou Li , Yuping Zhao

Biclustering algorithms play a central role in the biotechnological and biomedical domains. The knowledge extracted supports the extraction of putative regulatory modules, essential to understanding diseases, aiding therapy research, and…

Databases · Computer Science 2022-12-13 Leonardo Alexandre , Rafael S. Costa , Rui Henriques

We consider the problem of estimating overlapping community memberships in a network, where each node can belong to multiple communities. More than a few communities per node are difficult to both estimate and interpret, so we focus on…

Social and Information Networks · Computer Science 2021-06-23 Jesús Arroyo , Elizaveta Levina

As networks continue to increase in size, current methods must be capable of handling large numbers of nodes and edges in order to be practically relevant. Instead of working directly with the entire (large) network, analyzing sub-networks…

Social and Information Networks · Computer Science 2025-04-03 Eric Yanchenko

In this paper, we investigate a coupled polar code architecture that supports both local and global decoding. This local-global construction is motivated by practical applications in data storage and transmission where reduced-latency…

Information Theory · Computer Science 2023-01-09 Ziyuan Zhu , Wei Wu , Paul H. Siegel

People belong to multiple communities, words belong to multiple topics, and books cover multiple genres; overlapping clusters are commonplace. Many existing overlapping clustering methods model each person (or word, or book) as a…

Machine Learning · Statistics 2018-11-06 Xueyu Mao , Purnamrita Sarkar , Deepayan Chakrabarti

Practical random network coding based schemes for multicast include a header in each packet that records the transformation between the sources and the terminal. The header introduces an overhead that can be significant in certain…

Information Theory · Computer Science 2010-06-03 Shizheng Li , Aditya Ramamoorthy

Overlapping community detection is a key problem in graph mining. Some research has considered applying graph convolutional networks (GCN) to tackle the problem. However, it is still challenging to incorporate deep graph convolutional…

Artificial Intelligence · Computer Science 2024-10-01 Md Nurul Muttakin , Md Iqbal Hossain , Md Saidur Rahman

Among the novel metrics used to study the relative importance of nodes in complex networks, k-core decomposition has found a number of applications in areas as diverse as sociology, proteinomics, graph visualization, and distributed system…

Other Computer Science · Computer Science 2011-03-30 Alberto Montresor , Francesco De Pellegrini , Daniele Miorandi

A new class of folded subspace codes for noncoherent network coding is presented. The codes can correct insertions and deletions beyond the unique decoding radius for any code rate $R\in[0,1]$. An efficient interpolation-based decoding…

Information Theory · Computer Science 2015-04-22 Hannes Bartz , Vladimir Sidorenko

We study the problem of deep joint source-channel coding (D-JSCC) for correlated image sources, where each source is transmitted through a noisy independent channel to the common receiver. In particular, we consider a pair of images…

Information Theory · Computer Science 2022-01-26 Sixian Wang , Ke Yang , Jincheng Dai , Kai Niu

K-clique percolation is an overlapping community finding algorithm which extracts particular structures, comprised of overlapping cliques, from complex networks. While it is conceptually straightforward, and can be elegantly expressed using…

Social and Information Networks · Computer Science 2012-05-02 Fergal Reid , Aaron McDaid , Neil Hurley

We consider the distributed message-passing {LOCAL} model. In this model a communication network is represented by a graph where vertices host processors, and communication is performed over the edges. Computation proceeds in synchronous…

Distributed, Parallel, and Cluster Computing · Computer Science 2012-05-01 Leonid Barenboim

Existing interpretation algorithms have found that, even deep models make the same and right predictions on the same image, they might rely on different sets of input features for classification. However, among these sets of features, some…

Machine Learning · Computer Science 2021-09-03 Xuhong Li , Haoyi Xiong , Siyu Huang , Shilei Ji , Dejing Dou

The CUR decomposition is a technique for low-rank approximation that selects small subsets of the columns and rows of a given matrix to use as bases for its column and rowspaces. It has recently attracted much interest, as it has several…

Numerical Analysis · Mathematics 2022-06-06 Yijun Dong , Per-Gunnar Martinsson

Constrained sequence codes have been widely used in modern communication and data storage systems. Sequences encoded with constrained sequence codes satisfy constraints imposed by the physical channel, hence enabling efficient and reliable…

Information Theory · Computer Science 2018-09-07 Congzhe Cao , Duanshun Li , Ivan Fair

No community detection algorithm can be optimal for all possible networks, thus it is important to identify whether the algorithm is suitable for a given network. We propose a multi-step algorithmic solution scheme for overlapping community…

Social and Information Networks · Computer Science 2020-06-24 Tianyi Li , Pan Zhang

Compositional Explanations is a method for identifying logical formulas of concepts that approximate the neurons' behavior. However, these explanations are linked to the small spectrum of neuron activations (i.e., the highest ones) used to…

Machine Learning · Computer Science 2023-10-31 Biagio La Rosa , Leilani H. Gilpin , Roberto Capobianco

Image forensics, aiming to ensure the authenticity of the image, has made great progress in dealing with common image manipulation such as copy-move, splicing, and inpainting in the past decades. However, only a few researchers pay…

Computer Vision and Pattern Recognition · Computer Science 2022-04-26 Yushu Zhang , Nuo Chen , Shuren Qi , Mingfu Xue , Xiaochun Cao