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Template matching by normalized cross correlation (NCC) is widely used for finding image correspondences. We improve the robustness of this algorithm by preprocessing images with "siamese" convolutional networks trained to maximize the…

Computer Vision and Pattern Recognition · Computer Science 2017-05-25 Davit Buniatyan , Thomas Macrina , Dodam Ih , Jonathan Zung , H. Sebastian Seung

Comparing the internal representations of neural networks is a central goal in both neuroscience and machine learning. Standard alignment metrics operate on raw neural activations, implicitly assuming that similar representations produce…

Machine Learning · Computer Science 2026-04-02 Sunny Liu , Habon Issa , André Longon , Liv Gorton , Meenakshi Khosla , David Klindt

Image decomposition plays a crucial role in various computer vision tasks, enabling the analysis and manipulation of visual content at a fundamental level. Overlapping images, which occur when multiple objects or scenes partially occlude…

Computer Vision and Pattern Recognition · Computer Science 2024-06-06 Saúl Alonso-Monsalve , Davide Sgalaberna , Xingyu Zhao , Adrien Molines , Clark McGrew , André Rubbia

Interaction networks are of central importance in post-genomic molecular biology, with increasing amounts of data becoming available by high-throughput methods. Examples are gene regulatory networks or protein interaction maps. The main…

Statistical Mechanics · Physics 2009-11-10 Johannes Berg , Michael Lässig

Nucleus decompositions have been shown to be a useful tool for finding dense subgraphs. The coreness value of a clique represents its density based on the number of other cliques it is adjacent to. One useful output of nucleus decomposition…

Distributed, Parallel, and Cluster Computing · Computer Science 2024-01-23 Jessica Shi , Laxman Dhulipala , Julian Shun

In this paper, a new variant of an algorithm for normalized cross-correlation (NCC) is proposed in the context of template matching in images. The proposed algorithm is based on the precomputation of a template image approximation, enabling…

Computer Vision and Pattern Recognition · Computer Science 2025-02-04 Davor Marušić , Siniša Popović , Zoran Kalafatić

This paper addresses the problem of distributed coding of images whose correlation is driven by the motion of objects or positioning of the vision sensors. It concentrates on the problem where images are encoded with compressed linear…

Computer Vision and Pattern Recognition · Computer Science 2015-06-03 Vijayaraghavan Thirumalai , Pascal Frossard

Cooperative Co-evolution, through the decomposition of the problem space, is a primary approach for solving large-scale global optimization problems. Typically, when the subspaces are disjoint, the algorithms demonstrate significantly both…

Neural and Evolutionary Computing · Computer Science 2025-03-31 Wenjie Qiu , Hongshu Guo , Zeyuan Ma , Yue-Jiao Gong

In this paper, we investigate the problem of recovering source information from an incomplete set of network coded data. We first study the theoretical performance of such systems under maximum a posteriori (MAP) decoding and derive the…

Information Theory · Computer Science 2015-03-16 Eirina Bourtsoulatze , Nikolaos Thomos , Pascal Frossard

Upcoming many core processors are expected to employ a distributed memory architecture similar to currently available supercomputers, but parallel pattern mining algorithms amenable to the architecture are not comprehensively studied. We…

Distributed, Parallel, and Cluster Computing · Computer Science 2015-10-28 Kazuki Yoshizoe , Aika Terada , Koji Tsuda

In order to overcome the limitations imposed by DNA barcoding when multiplexing a large number of samples in the current generation of high-throughput sequencing instruments, we have recently proposed a new protocol that leverages advances…

Quantitative Methods · Quantitative Biology 2013-08-02 Denisa Duma , Mary Wootters , Anna C. Gilbert , Hung Q. Ngo , Atri Rudra , Matthew Alpert , Timothy J. Close , Gianfranco Ciardo , Stefano Lonardi

Molecular sequence analysis is crucial for comprehending several biological processes, including protein-protein interactions, functional annotation, and disease classification. The large number of sequences and the inherently complicated…

Genomics · Quantitative Biology 2025-10-10 Sarwan Ali , Prakash Chourasia , Bipin Koirala , Murray Patterson

Genetic information is encoded in a linear sequence of nucleotides, represented by letters ranging from thousands to billions. Mutations refer to changes in the DNA or RNA nucleotide sequence. Thus, mutation detection is vital in all areas…

In this paper, we propose new coupled codes constructed by overlapping circular spatially-coupled low-density parity-check (SC-LDPC) codes, which show better asymptotic and finite-length decoding performance compared to the conventional…

Information Theory · Computer Science 2018-03-28 Heeyoul Kwak , Bohwan Jun , Pilwoong Yang , Jong-Seon No , Dong-Joon Shin

Person image generation aims to perform non-rigid deformation on source images, which generally requires unaligned data pairs for training. Recently, self-supervised methods express great prospects in this task by merging the disentangled…

Computer Vision and Pattern Recognition · Computer Science 2022-12-15 Zijian Wang , Xingqun Qi , Kun Yuan , Muyi Sun

In this paper we describe a new method for detecting and counting a repeating object in an image. While the method relies on a fairly sophisticated deformable part model, unlike existing techniques it estimates the model parameters in an…

Computer Vision and Pattern Recognition · Computer Science 2019-04-16 Inbar Huberman , Raanan Fattal

Motivated by applications in social network community analysis, we introduce a new clustering paradigm termed motif clustering. Unlike classical clustering, motif clustering aims to minimize the number of clustering errors associated with…

Social and Information Networks · Computer Science 2017-01-31 Pan Li , Hoang Dau , Gregory Puleo , Olgica Milenkovic

This paper introduces a new family of reconstruction codes which is motivated by applications in DNA data storage and sequencing. In such applications, DNA strands are sequenced by reading some subset of their substrings. While previous…

Information Theory · Computer Science 2022-05-10 Yonatan Yehezkeally , Daniella Bar-Lev , Sagi Marcovich , Eitan Yaakobi

Decoding approaches are widely used in neuroscience and machine learning to compare stimulus representations across neural systems, such as different brain regions, organisms, and deep learning models. Popular methods include decoding…

Neurons and Cognition · Quantitative Biology 2026-05-08 Johannes Bertram , Luciano Dyballa , T. Anderson Keller , Savik Kinger , Steven W. Zucker

The growing demand for highly reliable communication systems drives the research and development of algorithms that identify and correct errors during data transmission and storage. This need becomes even more critical in hard-to-access or…

Cryptography and Security · Computer Science 2025-04-17 Andrew Rafael Fritsch , César Augusto Missio Marcon
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